SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5GTH designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5GTH_SQD_A_410 | 78% | 29% | 0.065 | 0.945 | 0.97 | 1.86 | 3 | 12 | 3 | 0 | 100% | 1 |
| 5GTH_SQD_a_410 | 75% | 32% | 0.069 | 0.939 | 0.96 | 1.73 | 3 | 12 | 4 | 0 | 100% | 1 |
| 5GTH_SQD_L_101 | 63% | 34% | 0.074 | 0.895 | 1.02 | 1.53 | 3 | 9 | 8 | 0 | 100% | 1 |
| 5GTH_SQD_B_620 | 61% | 34% | 0.076 | 0.886 | 1.07 | 1.48 | 4 | 10 | 3 | 0 | 100% | 1 |
| 5GTH_SQD_A_412 | 60% | 42% | 0.072 | 0.875 | 1.04 | 1.1 | 3 | 6 | 4 | 0 | 100% | 1 |
| 5GTH_SQD_a_412 | 56% | 39% | 0.076 | 0.861 | 1.06 | 1.24 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5GTH_SQD_D_413 | 49% | 27% | 0.092 | 0.905 | 1.15 | 1.78 | 3 | 12 | 1 | 0 | 80% | 1 |
| 5GTH_SQD_f_101 | 20% | 34% | 0.11 | 0.777 | 1.19 | 1.38 | 3 | 7 | 0 | 0 | 80% | 1 |
| 5V2C_SQD_A_612 | 85% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 79% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 2 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 74% | 28% | 0.081 | 0.955 | 0.94 | 1.94 | 3 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 73% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 8 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 71% | 34% | 0.081 | 0.944 | 0.97 | 1.59 | 3 | 13 | 2 | 0 | 100% | 1 |
