NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5GQR designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5GQR_NAG_B_701 | 30% | 53% | 0.225 | 0.889 | 0.58 | 1.22 | - | 1 | 0 | 0 | 100% | 0.9333 |
5GQR_NAG_K_302 | 28% | 19% | 0.216 | 0.868 | 1.13 | 2.27 | 1 | 3 | 0 | 0 | 100% | 0.9333 |
5GQR_NAG_B_702 | 12% | 48% | 0.318 | 0.855 | 0.57 | 1.42 | - | 2 | 0 | 0 | 100% | 0.9333 |
5GQR_NAG_K_301 | 4% | 55% | 0.323 | 0.699 | 0.47 | 1.24 | - | 2 | 0 | 0 | 100% | 0.9333 |
5GR9_NAG_B_706 | 73% | 52% | 0.146 | 0.975 | 0.53 | 1.31 | - | 1 | 0 | 0 | 100% | 0.9333 |
5JFI_NAG_B_703 | 68% | 53% | 0.154 | 0.966 | 0.83 | 1 | 1 | 1 | 1 | 0 | 100% | 0.9333 |
5JFK_NAG_B_703 | 59% | 68% | 0.18 | 0.963 | 0.68 | 0.55 | - | - | 1 | 0 | 100% | 0.9333 |
5GIJ_NAG_B_706 | 46% | 55% | 0.177 | 0.911 | 0.45 | 1.27 | - | 2 | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3CQL_NAG_B_244 | 100% | 68% | 0.029 | 0.987 | 0.42 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |