Ligand validation:5EKP

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5EKP designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5EKP_UDP_A_401	64%	34%	0.136	0.935	0.94	1.66	-	6	1	0	100%	1
5EKP_UDP_C_401	43%	33%	0.183	0.905	0.95	1.69	-	7	0	0	100%	1
5EKP_UDP_B_401	42%	33%	0.183	0.903	0.94	1.67	-	7	0	0	100%	1
5EKP_UDP_D_401	34%	33%	0.183	0.867	0.95	1.68	-	7	1	0	100%	1
5EKE_UDP_A_401	77%	34%	0.122	0.961	0.94	1.65	-	7	1	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
2B69_UDP_A_900	100%	42%	0.032	0.992	1.03	1.21	2	4	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.