Ligand validation:5DPF

DMS: DIMETHYL SULFOXIDE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5DPF_DMS_E_407	62%	69%	0.113	0.954	0.62	0.43	-	-	0	0	100%	1
5DPF_DMS_E_409	58%	77%	0.125	0.957	0.69	0.16	-	-	0	0	100%	1
5DPF_DMS_E_408	51%	71%	0.144	0.953	0.7	0.28	-	-	0	0	100%	1
5DPF_DMS_E_410	51%	67%	0.129	0.927	0.55	0.53	-	-	0	0	100%	1
6YMS_DMS_E_406	90%	87%	0.061	0.992	0.56	0.09	-	-	0	0	100%	0.83
1Y3G_DMS_E_802	88%	97%	0.063	0.984	0.28	0.1	-	-	0	0	100%	1
3FV4_DMS_A_325	85%	29%	0.061	0.969	2.42	0.49	1	-	1	0	100%	1
6SB9_DMS_E_406	81%	60%	0.08	0.982	0.67	0.67	-	-	0	0	100%	1
6SCK_DMS_E_411	81%	62%	0.079	0.98	0.62	0.67	-	-	0	0	100%	1
8DZ9_DMS_B_402	100%	95%	0.017	0.998	0.21	0.21	-	-	1	0	100%	1
4LAW_DMS_B_301	100%	17%	0.019	0.999	2.83	0.76	1	-	4	0	100%	1
6TOV_DMS_A_102	100%	86%	0.021	0.999	0.32	0.35	-	-	0	0	100%	1
3T09_DMS_D_8005	100%	24%	0.025	0.997	2.66	0.56	1	-	0	0	100%	1
4KUP_DMS_A_403	99%	88%	0.027	0.998	0.53	0.1	-	-	0	0	100%	0.92

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.