Ligand validation:5DKD

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5DKD_EDO_A_1603	37%	74%	0.135	0.868	0.64	0.26	-	-	0	0	100%	1
5DKD_EDO_B_1603	26%	89%	0.142	0.824	0.34	0.26	-	-	0	0	100%	1
5DKD_EDO_A_1602	20%	54%	0.176	0.842	0.43	1.14	-	-	0	0	100%	1
5DKD_EDO_B_1602	15%	81%	0.158	0.776	0.44	0.34	-	-	1	0	100%	1
5DKD_EDO_B_1604	9%	89%	0.201	0.782	0.41	0.18	-	-	0	0	100%	1
5DKD_EDO_A_1604	7%	68%	0.169	0.701	0.42	0.64	-	-	0	0	100%	1
6ZS2_EDO_B_1602	57%	77%	0.11	0.923	0.42	0.41	-	-	0	0	100%	1
9DTX_EDO_C_303	33%	99%	0.134	0.847	0.08	0.19	-	-	0	0	100%	1
6HR2_EDO_H_201	26%	79%	0.156	0.848	0.51	0.3	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.