Ligand validation:5DBY

LMR: (2S)-2-hydroxybutanedioic acid

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5DBY_LMR_A_616	12%	38%	0.17	0.764	1.15	1.2	-	1	0	0	100%	0.8
4ZBR_LMR_A_606	48%	38%	0.11	0.883	1.12	1.26	-	1	0	0	100%	1
9S43_LMR_A_603	39%	20%	0.105	0.83	1.49	1.84	2	3	0	0	100%	1
7Q4X_LMR_A_608	37%	32%	0.135	0.868	1.14	1.54	-	2	5	0	100%	1
4ZBQ_LMR_A_606	33%	29%	0.134	0.849	1.01	1.82	-	2	0	0	100%	1
9S42_LMR_A_605	29%	18%	0.106	0.778	2.19	1.31	3	1	1	0	100%	1
6UQ8_LMR_B_602	99%	27%	0.027	0.992	1.16	1.76	-	4	0	0	100%	1
3RGL_LMR_B_501	99%	28%	0.031	0.994	1.04	1.83	-	3	0	0	100%	1
4O7M_LMR_B_402	98%	27%	0.03	0.988	1.48	1.48	1	1	0	0	100%	1
3ES8_LMR_B_392	97%	18%	0.035	0.986	1.32	2.14	-	2	1	0	100%	1
9DWO_LMR_A_401	97%	37%	0.034	0.984	1	1.39	-	2	0	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.