Ligand validation:5D8X

MRD: (4R)-2-METHYLPENTANE-2,4-DIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5D8X_MRD_G_203	56%	87%	0.111	0.92	0.37	0.27	-	-	0	0	100%	1
5D8X_MRD_B_202	54%	73%	0.116	0.923	0.36	0.55	-	-	0	0	100%	1
5D8X_MRD_M_202	54%	84%	0.118	0.923	0.29	0.41	-	-	0	0	100%	1
5D8X_MRD_D_202	53%	86%	0.113	0.91	0.31	0.35	-	-	0	0	100%	1
5D8X_MRD_U_202	53%	79%	0.116	0.915	0.34	0.46	-	-	0	0	100%	1
5D8X_MRD_W_202	51%	88%	0.118	0.911	0.28	0.33	-	-	0	0	100%	1
5D8X_MRD_T_201	48%	87%	0.126	0.908	0.33	0.32	-	-	0	0	100%	1
5D8X_MRD_O_201	47%	88%	0.125	0.904	0.42	0.2	-	-	0	0	100%	1
5D8X_MRD_N_201	45%	76%	0.129	0.897	0.35	0.49	-	-	1	0	100%	1
5D8X_MRD_V_201	43%	83%	0.132	0.893	0.31	0.42	-	-	0	0	100%	1
5D8X_MRD_P_201	42%	84%	0.135	0.893	0.32	0.4	-	-	0	0	100%	1
5D8X_MRD_K_202	40%	80%	0.138	0.889	0.38	0.4	-	-	0	0	100%	1
5D8X_MRD_I_201	37%	86%	0.138	0.875	0.32	0.36	-	-	0	0	100%	1
5D8X_MRD_F_201	36%	78%	0.141	0.873	0.34	0.47	-	-	0	0	100%	1
5D8X_MRD_X_201	33%	85%	0.148	0.87	0.35	0.35	-	-	0	0	100%	1
5D8X_MRD_H_201	31%	86%	0.142	0.851	0.37	0.31	-	-	0	0	100%	1
5D8X_MRD_E_203	31%	80%	0.149	0.862	0.32	0.46	-	-	0	0	100%	1
5D8X_MRD_R_202	28%	65%	0.156	0.86	0.41	0.74	-	-	0	0	100%	1
5D8X_MRD_M_203	22%	59%	0.166	0.839	0.53	0.87	-	-	0	0	100%	1
5D8X_MRD_A_203	21%	81%	0.165	0.831	0.36	0.4	-	-	0	0	100%	1
5D8X_MRD_E_204	20%	58%	0.167	0.829	0.48	0.92	-	-	0	0	100%	1
5D8X_MRD_J_202	19%	54%	0.169	0.823	0.56	1.02	-	-	0	0	100%	1
5D8X_MRD_S_202	13%	67%	0.19	0.807	0.39	0.68	-	-	4	0	100%	1
5D8X_MRD_N_202	8%	64%	0.21	0.783	0.42	0.76	-	-	5	0	100%	1
3UOM_MRD_D_401	99%	89%	0.031	0.993	0.31	0.29	-	-	0	0	100%	1
2IY6_MRD_A_1532	98%	81%	0.032	0.988	0.32	0.44	-	-	0	0	100%	1
2BJA_MRD_A_1520	98%	62%	0.036	0.994	0.63	0.64	-	-	3	0	100%	1
5W4T_MRD_A_408	97%	84%	0.039	0.993	0.32	0.39	-	-	0	0	100%	1
24XI_MRD_A_401	97%	57%	0.036	0.987	0.49	0.97	-	-	2	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.