Ligand validation:5D59

78M: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE

78M is a Ligand Of Interest in 5D59 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5D59_78M_A_505	40%	43%	0.14	0.892	0.74	1.35	1	2	3	100%	1
5D59_78M_A_508	34%	50%	0.149	0.877	0.71	1.09	1	1	4	100%	0.95
5D59_78M_A_512	26%	51%	0.165	0.862	0.73	1	1	1	3	100%	0.94
5D59_78M_A_507	26%	51%	0.164	0.859	0.68	1.04	1	1	1	100%	1
5D59_78M_A_518	24%	51%	0.168	0.856	0.73	1.01	1	1	2	100%	0.92
5D59_78M_A_513	21%	53%	0.174	0.848	0.75	0.92	1	1	2	100%	0.93
5D59_78M_A_503	21%	51%	0.168	0.837	0.73	1	1	1	4	100%	0.9
5D59_78M_A_504	18%	50%	0.184	0.843	0.72	1.08	1	1	0	100%	0.97
5D59_78M_A_510	16%	53%	0.184	0.825	0.76	0.91	1	1	4	100%	0.93
5D59_78M_A_511	13%	53%	0.161	0.763	0.73	0.93	1	1	2	100%	1
5D59_78M_A_524	12%	51%	0.203	0.824	0.76	0.99	1	1	0	100%	1
5D59_78M_A_519	11%	52%	0.186	0.787	0.77	0.94	1	1	2	100%	0.97
5D59_78M_A_506	9%	52%	0.194	0.777	0.74	0.98	1	1	2	100%	0.98
5D59_78M_A_521	8%	51%	0.203	0.778	0.76	1	1	1	6	100%	0.89
5D59_78M_A_509	7%	52%	0.2	0.76	0.75	0.96	1	1	4	100%	0.97
5D59_78M_A_517	7%	52%	0.206	0.762	0.76	0.92	1	1	2	100%	0.95
5D59_78M_A_523	6%	52%	0.203	0.743	0.74	0.96	1	1	4	100%	1
5D59_78M_A_522	5%	51%	0.225	0.761	0.74	1	1	1	3	100%	0.84
5D59_78M_A_515	5%	50%	0.237	0.773	0.76	1.03	1	1	0	100%	0.88
5D59_78M_A_514	5%	51%	0.229	0.758	0.75	1	1	1	0	100%	0.86
5D59_78M_A_520	4%	50%	0.242	0.753	0.75	1.03	1	1	5	100%	0.8
5D58_78M_A_514	51%	52%	0.121	0.914	0.72	1	1	1	5	100%	0.94
4D2D_78M_A_1483	43%	44%	0.129	0.89	0.92	1.17	1	2	5	100%	1
4XNJ_78M_A_503	43%	52%	0.137	0.901	0.77	0.93	1	1	1	100%	1
6YOF_78M_A_512	40%	49%	0.138	0.888	0.85	1.01	2	1	2	100%	0.95
6FMY_78M_A_511	39%	41%	0.116	0.912	1	1.2	2	1	1	73%	0.93
4AZL_78M_B_1498	96%	47%	0.044	0.992	0.99	0.97	1	1	1	100%	1
5YS8_78M_B_203	84%	40%	0.067	0.975	1.36	0.91	2	1	2	100%	1
4AFK_78M_A_1510	69%	48%	0.076	0.925	0.9	0.99	1	2	0	100%	1
5XJ9_78M_A_306	57%	95%	0.096	0.899	0.2	0.22	-	-	2	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5D59 | pdb_00005d59

78M: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE

78M is a Ligand Of Interest in 5D59 designated by the RCSB