Ligand validation:5D40

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5D40_GOL_B_504	86%	77%	0.065	0.981	0.3	0.53	-	-	0	0	100%	1
5D40_GOL_B_503	79%	58%	0.069	0.956	1.13	0.33	-	-	0	0	100%	1
5D40_GOL_B_507	70%	62%	0.081	0.938	0.76	0.51	-	-	0	0	100%	1
5D40_GOL_B_508	68%	38%	0.086	0.939	1.22	1.15	1	1	0	0	100%	1
5D40_GOL_A_503	67%	12%	0.093	0.942	1.96	2.13	1	1	0	0	100%	1
5D40_GOL_A_504	60%	34%	0.099	0.92	1.54	1.07	1	-	0	0	100%	1
5D40_GOL_B_505	59%	17%	0.111	0.936	1.79	1.77	1	1	1	0	100%	1
5D40_GOL_B_509	57%	75%	0.098	0.906	0.68	0.21	-	-	0	0	100%	1
5D40_GOL_B_506	57%	68%	0.106	0.917	0.35	0.69	-	-	0	0	100%	1
5D3U_GOL_A_503	81%	98%	0.074	0.974	0.12	0.2	-	-	0	0	100%	1
4TPO_GOL_A_503	79%	60%	0.073	0.964	0.82	0.53	-	-	0	0	100%	1
4TPN_GOL_A_503	70%	62%	0.09	0.954	0.6	0.65	-	-	0	0	100%	1
2YGX_GOL_A_1398	100%	61%	0.006	1	0.38	0.93	-	-	2	0	100%	1
5WM2_GOL_A_603	100%	86%	0.011	0.999	0.53	0.16	-	-	0	0	100%	1
5MR6_GOL_B_602	100%	60%	0.012	0.999	0.4	0.92	-	-	0	0	100%	1
5W5T_GOL_D_506	100%	87%	0.014	0.998	0.38	0.26	-	-	0	0	100%	1
3MG3_GOL_A_324	100%	77%	0.015	0.997	0.24	0.58	-	-	0	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.