Ligand validation:5BVG

IMD: IMIDAZOLE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5BVG_IMD_B_602	84%	69%	0.061	0.964	0.51	0.53	-	-	0	0	100%	1
5BVG_IMD_D_601	81%	80%	0.063	0.955	0.61	0.19	-	-	1	0	100%	1
5BVG_IMD_B_601	74%	64%	0.074	0.945	0.5	0.7	-	-	1	0	100%	1
5BVG_IMD_A_503	73%	73%	0.075	0.941	0.48	0.43	-	-	0	0	100%	1
5BVG_IMD_B_603	62%	77%	0.087	0.91	0.55	0.29	-	-	1	0	100%	1
5BVG_IMD_C_503	58%	68%	0.09	0.895	0.58	0.47	-	-	1	0	100%	1
5BVG_IMD_D_602	57%	69%	0.109	0.922	0.53	0.5	-	-	0	0	100%	1
5BVG_IMD_D_603	53%	81%	0.1	0.889	0.5	0.28	-	-	1	0	100%	1
5BVG_IMD_C_505	1%	54%	0.298	0.716	0.67	0.91	-	-	5	0	100%	1
7JRF_IMD_A_503	96%	84%	0.039	0.983	0.29	0.41	-	-	0	0	100%	1
4TKV_IMD_B_602	95%	68%	0.042	0.982	0.38	0.68	-	-	0	0	100%	1
4TKU_IMD_B_603	94%	67%	0.042	0.978	0.43	0.65	-	-	0	0	100%	1
6OP3_IMD_D_603	85%	68%	0.056	0.958	0.79	0.3	-	-	1	0	100%	1
3U7Q_IMD_D_524	83%	66%	0.067	0.97	0.7	0.42	-	-	1	0	100%	1
6G7X_IMD_E_302	100%	65%	0.021	0.995	0.69	0.47	-	-	0	0	100%	1
6THT_IMD_A_301	100%	69%	0.022	0.995	0.63	0.4	-	-	0	0	100%	1
3TCL_IMD_A_218	100%	63%	0.024	0.996	0.82	0.42	-	-	0	0	100%	1
1CXA_IMD_A_125	99%	54%	0.025	0.996	0.62	0.97	-	-	0	0	100%	1
2Z3T_IMD_B_501	99%	56%	0.026	0.995	0.66	0.83	-	-	0	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.