5BP4 | pdb_00005bp4

NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 5BP4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5BP4_NAP_G_3001	82%	51%	0.081	0.941	0.86	0.93	1	3	0	100%	1
5BP4_NAP_O_3001	81%	48%	0.089	0.946	0.93	0.99	3	3	1	100%	1
5BP4_NAP_M_3001	79%	47%	0.091	0.94	0.9	1.03	3	4	0	100%	1
5BP4_NAP_L_3001	76%	49%	0.094	0.933	0.85	1.01	2	5	1	100%	1
5BP4_NAP_A_3001	73%	50%	0.105	0.935	0.96	0.85	1	2	2	100%	1
5BP4_NAP_B_3001	72%	48%	0.104	0.93	0.83	1.06	2	5	2	100%	1
5BP4_NAP_I_3001	71%	55%	0.107	0.93	0.78	0.81	1	2	1	100%	1
5BP4_NAP_K_3001	70%	39%	0.107	0.928	1.43	0.89	2	3	3	100%	1
5BP4_NAP_P_3001	70%	46%	0.106	0.926	0.83	1.13	2	3	0	100%	1
5BP4_NAP_C_3001	68%	59%	0.105	0.916	0.65	0.78	1	1	1	100%	1
5BP4_NAP_J_3001	67%	42%	0.107	0.918	0.72	1.4	1	4	0	100%	1
5BP4_NAP_D_3001	66%	51%	0.111	0.919	0.83	0.95	1	1	2	100%	1
5BP4_NAP_N_3001	66%	49%	0.115	0.922	0.9	0.95	2	3	0	100%	1
5BP4_NAP_E_3001	60%	52%	0.11	0.894	0.85	0.89	2	4	1	100%	1
5BP4_NAP_F_3001	53%	45%	0.126	0.885	1.05	0.99	2	4	2	100%	1
5BP4_NAP_C_3002	52%	55%	0.069	0.887	0.64	0.93	-	4	0	65%	1
5BP4_NAP_B_3002	50%	51%	0.069	0.896	0.65	1.11	-	3	0	56%	1
5BP4_NAP_H_3001	50%	53%	0.132	0.883	0.74	0.94	1	3	0	100%	1
5BP4_NAP_F_3002	49%	56%	0.07	0.893	0.55	0.99	-	5	0	56%	1
5BP4_NAP_K_3002	46%	58%	0.077	0.886	0.42	1.03	-	5	0	56%	1
5BP4_NAP_R_3001	43%	60%	0.118	0.84	0.67	0.71	1	2	0	100%	1
5BP4_NAP_J_3002	43%	53%	0.069	0.865	0.6	1.07	-	3	0	56%	1
5BP4_NAP_N_3002	42%	49%	0.081	0.875	0.7	1.15	1	2	0	56%	1
5BP4_NAP_H_3002	40%	57%	0.069	0.855	0.54	0.95	-	4	0	56%	1
5BP4_NAP_D_3002	36%	55%	0.076	0.844	0.58	1	-	4	0	56%	1
5BP4_NAP_G_3002	31%	57%	0.081	0.823	0.48	1	-	3	0	56%	1
5BP4_NAP_P_3002	24%	54%	0.089	0.793	0.56	1.07	-	4	0	56%	1
5BP4_NAP_A_3002	16%	58%	0.096	0.749	0.49	0.96	-	2	0	56%	1
5BP4_NAP_Q_3001	15%	51%	0.146	0.711	0.9	0.9	1	3	0	100%	1
5BP4_NAP_M_3002	5%	53%	0.095	0.578	0.75	0.94	1	2	0	56%	1
2J8T_NAP_A_1316	100%	51%	0.015	0.999	0.88	0.9	2	1	1	100%	1
6IJX_NAP_A_401	100%	58%	0.014	0.998	0.54	0.92	1	3	4	100%	1
8BJL_NAP_A_401	100%	68%	0.013	0.999	0.45	0.62	-	-	1	100%	1
8FH5_NAP_A_401	100%	60%	0.013	0.998	0.72	0.66	1	1	2	100%	1
8G50_NAP_B_202	100%	39%	0.013	0.998	1.11	1.17	5	9	1	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.