PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5B3S designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5B3S_PGV_C_304 | 74% | 55% | 0.089 | 0.974 | 0.7 | 0.87 | 1 | 2 | 1 | 0 | 98% | 1 |
| 5B3S_PGV_N_609 | 71% | 44% | 0.095 | 0.966 | 0.97 | 1.1 | 3 | 4 | 0 | 0 | 100% | 1 |
| 5B3S_PGV_P_305 | 70% | 49% | 0.098 | 0.967 | 0.65 | 1.18 | 1 | 5 | 4 | 0 | 100% | 1 |
| 5B3S_PGV_A_608 | 69% | 46% | 0.102 | 0.968 | 0.85 | 1.13 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5B3S_PGV_A_607 | 12% | 42% | 0.194 | 0.821 | 1.06 | 1.08 | 2 | 4 | 5 | 0 | 94% | 1 |
| 5B3S_PGV_N_607 | 8% | 40% | 0.218 | 0.804 | 1.01 | 1.24 | 2 | 8 | 8 | 0 | 100% | 1 |
| 5B3S_PGV_C_305 | 5% | 25% | 0.236 | 0.769 | 1.26 | 1.77 | 2 | 9 | 4 | 0 | 100% | 1 |
| 5B3S_PGV_G_104 | 4% | 36% | 0.233 | 0.729 | 1.14 | 1.34 | 2 | 5 | 8 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 93% | 49% | 0.047 | 0.982 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 6NKN_PGV_A_607 | 93% | 41% | 0.046 | 0.98 | 0.85 | 1.36 | 2 | 5 | 0 | 0 | 100% | 1 |
| 3ASN_PGV_A_522 | 87% | 44% | 0.061 | 0.977 | 0.86 | 1.18 | 2 | 2 | 1 | 0 | 100% | 1 |
| 6NMF_PGV_A_606 | 87% | 49% | 0.061 | 0.975 | 0.93 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 83% | 50% | 0.073 | 0.982 | 0.74 | 1.06 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5X1F_PGV_A_608 | 82% | 39% | 0.074 | 0.977 | 0.88 | 1.42 | 3 | 7 | 0 | 0 | 100% | 1 |