Ligand validation:5AVS

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5AVS designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5AVS_NAG_B_4021	1%	52%	0.632	0.709	0.6	1.24	-	2	0	0	100%	0.9333
3A3Y_NAG_B_4001	25%	63%	0.222	0.87	0.53	0.89	-	1	2	0	93%	0.9333
5AW9_NAG_B_4021	7%	50%	0.336	0.789	0.77	1.14	-	1	0	0	100%	0.9333
5AW0_NAG_B_4021	5%	52%	0.393	0.811	0.59	1.24	-	2	0	0	100%	0.9333
5AVW_NAG_B_4021	4%	52%	0.385	0.753	0.61	1.24	-	2	0	0	100%	0.9333
2ZXE_NAG_B_4021	3%	52%	0.376	0.69	0.6	1.24	-	2	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_B_501	100%	68%	0.024	0.991	0.38	0.86	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.