NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5AFM designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5AFM_NAG_A_301 75% 24% 0.064 0.9091.35 1.73 3 54093%0.9333
5AFM_NAG_D_301 67% 18% 0.078 0.8981.31 2.23 2 55093%0.9333
5AFM_NAG_E_301 63% 28% 0.079 0.8861.25 1.63 3 46093%0.9333
5AFM_NAG_C_301 59% 24% 0.08 0.8731.4 1.68 3 51093%0.9333
5AFM_NAG_E_302 47% 18% 0.1 0.851.59 1.95 4 43093%0.9333
5AFM_NAG_B_301 43% 27% 0.097 0.8281.3 1.61 3 53093%0.9333
5AFM_NAG_A_302 31% 19% 0.104 0.7821.55 1.91 4 42093%0.9333
5AFM_NAG_D_302 27% 19% 0.113 0.7671.54 1.91 3 43093%0.9333
5AFM_NAG_C_302 12% 17% 0.144 0.6771.59 1.97 4 41093%0.9333
5AFM_NAG_B_302 6% 15% 0.124 0.563 1.71 2.07 6 42093%0.9333
5AFN_NAG_A_301 62% 38% 0.09 0.8910.62 1.76 - 41093%0.9333
5AFJ_NAG_A_301 58% 47% 0.091 0.8790.56 1.45 - 23093%0.9333
4HQP_NAG_C_801 20% 67% 0.09 0.690.51 0.75 - 100100%0.9333
3SQ9_NAG_C_901 15% 61% 0.11 0.6710.98 0.54 1 -30100%0.9333
3SQ6_NAG_H_901 14% 53% 0.142 0.6850.95 0.86 1 120100%0.9333
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%0.9333
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%0.9333
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%0.9333
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%0.9333
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%0.9333