TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 4ZU7 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4ZU7_TYD_A_201 | 66% | 15% | 0.083 | 0.922 | 1.66 | 2.01 | 4 | 13 | 0 | 0 | 100% | 1 |
| 4ZU7_TYD_D_201 | 61% | 17% | 0.09 | 0.909 | 1.95 | 1.62 | 6 | 5 | 0 | 0 | 100% | 1 |
| 4ZU7_TYD_C_201 | 56% | 18% | 0.098 | 0.898 | 1.66 | 1.8 | 7 | 8 | 1 | 0 | 100% | 1 |
| 4ZU7_TYD_B_201 | 55% | 15% | 0.096 | 0.893 | 1.72 | 1.97 | 6 | 8 | 6 | 0 | 100% | 1 |
| 4ZU7_TYD_F_201 | 53% | 21% | 0.1 | 0.889 | 1.19 | 2.04 | 3 | 9 | 1 | 0 | 100% | 1 |
| 4ZU7_TYD_G_201 | 44% | 22% | 0.11 | 0.862 | 1.55 | 1.67 | 6 | 8 | 0 | 0 | 100% | 1 |
| 4ZU7_TYD_E_201 | 43% | 15% | 0.111 | 0.861 | 1.67 | 2.04 | 5 | 13 | 2 | 0 | 100% | 1 |
| 4ZU7_TYD_H_201 | 42% | 19% | 0.108 | 0.85 | 1.79 | 1.64 | 6 | 8 | 1 | 0 | 100% | 1 |
| 4O9E_TYD_A_201 | 78% | 13% | 0.072 | 0.956 | 1.44 | 2.47 | 6 | 12 | 0 | 0 | 100% | 1 |
| 3OTI_TYD_A_377 | 98% | 24% | 0.035 | 0.989 | 1.32 | 1.78 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3EVO_TYD_A_160 | 98% | 22% | 0.036 | 0.99 | 1.41 | 1.81 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5WXK_TYD_A_401 | 97% | 21% | 0.037 | 0.987 | 1.33 | 1.94 | 3 | 6 | 0 | 0 | 100% | 1 |
| 1LVW_TYD_A_3002 | 96% | 30% | 0.041 | 0.984 | 1.78 | 1.05 | 4 | 2 | 0 | 0 | 100% | 1 |
| 3RYK_TYD_B_182 | 95% | 11% | 0.042 | 0.985 | 2.35 | 1.83 | 4 | 8 | 0 | 0 | 100% | 0.7 |














