Ligand validation:4YY1

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YY1 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YY1_NAG_C_601	35%	67%	0.159	0.844	0.46	0.82	-	1	0	0	100%	0.9333
4YY1_NAG_A_601	33%	68%	0.164	0.84	0.46	0.76	-	1	0	0	100%	0.9333
4YY1_NAG_D_501	20%	50%	0.19	0.79	0.48	1.44	-	1	1	0	100%	0.9333
4YY1_NAG_B_501	10%	47%	0.237	0.747	0.49	1.51	-	2	0	0	100%	0.9333
5BR6_NAG_C_402	99%	63%	0.046	0.984	0.7	0.73	1	1	1	0	100%	0.9333
5BR3_NAG_A_403	67%	79%	0.123	0.93	0.28	0.57	-	-	1	0	100%	0.9333
4WSV_NAG_E_403	58%	82%	0.126	0.905	0.26	0.54	-	-	0	0	100%	0.9333
5T0B_NAG_A_402	49%	36%	0.107	0.85	0.66	1.82	-	5	0	0	100%	0.9333
4XKD_NAG_A_402	47%	29%	0.128	0.867	0.85	1.94	1	6	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333
6MUF_NAG_G_630	100%	77%	0.026	0.994	0.29	0.61	-	-	2	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.