4YUU
DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4YUU designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4YUU_DGD_c2_517 | 49% | 55% | 0.16 | 0.918 | 0.89 | 0.84 | 2 | 2 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_C1_516 | 47% | 52% | 0.173 | 0.925 | 0.85 | 1 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_C1_517 | 47% | 56% | 0.175 | 0.92 | 0.86 | 0.85 | 2 | 3 | 0 | 0 | 97% | 0.9697 |
4YUU_DGD_c1_518 | 43% | 52% | 0.194 | 0.929 | 0.87 | 1 | 2 | 5 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_c2_514 | 43% | 52% | 0.199 | 0.933 | 0.87 | 0.97 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_h1_101 | 39% | 52% | 0.187 | 0.903 | 0.88 | 0.96 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_c1_520 | 33% | 55% | 0.223 | 0.912 | 0.87 | 0.86 | 2 | 2 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_c1_514 | 32% | 48% | 0.196 | 0.911 | 0.96 | 1.04 | 2 | 4 | 0 | 0 | 77% | 0.7727 |
4YUU_DGD_C1_515 | 29% | 49% | 0.19 | 0.888 | 0.96 | 1.01 | 2 | 4 | 0 | 0 | 79% | 0.7879 |
4YUU_DGD_h2_102 | 26% | 54% | 0.221 | 0.875 | 0.87 | 0.91 | 2 | 2 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_c2_516 | 26% | 48% | 0.204 | 0.882 | 0.96 | 1.03 | 2 | 3 | 0 | 0 | 79% | 0.7879 |
4YUU_DGD_H1_101 | 20% | 53% | 0.236 | 0.848 | 0.88 | 0.92 | 2 | 3 | 0 | 0 | 94% | 0.9394 |
4YUU_DGD_C2_512 | 17% | 43% | 0.201 | 0.868 | 1.16 | 1.06 | 2 | 2 | 0 | 0 | 50% | 0.5 |
4YUU_DGD_H2_101 | 15% | 54% | 0.262 | 0.834 | 0.88 | 0.91 | 2 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
5ZZN_DGD_c_517 | 85% | 45% | 0.09 | 0.966 | 1.05 | 1.06 | 3 | 5 | 0 | 0 | 94% | 0.9394 |