4YLH | pdb_00004ylh


YE1: [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE

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YE1 is a Ligand Of Interest in 4YLH designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YLH_YE1_G_502 99% 9% 0.028 0.9942.87 1.55 23 18 30100%1
4YLH_YE1_C_502 99% 7% 0.03 0.9933.32 1.54 32 1430100%1
4YLH_YE1_D_502 99% 12% 0.031 0.9932.51 1.61 25 1620100%1
4YLH_YE1_F_502 98% 8% 0.033 0.9932.65 2.02 25 25 30100%1
4YLH_YE1_K_502 98% 12% 0.033 0.9932.48 1.56 17 1200100%1
4YLH_YE1_E_502 98% 13% 0.035 0.9912.43 1.51 20 1350100%1
4YLH_YE1_B_502 98% 11% 0.035 0.9912.64 1.57 24 18 40100%1
4YLH_YE1_A_502 98% 11% 0.035 0.9912.71 1.54 21 19 10100%1
4YLH_YE1_L_502 98% 9% 0.036 0.992.8 1.74 22 20 10100%1
4YLH_YE1_H_502 97% 10% 0.04 0.992.65 1.67 24 20 50100%1
4YLH_YE1_I_502 96% 12% 0.041 0.992.49 1.56 17 1250100%1
4YLH_YE1_J_502 95% 9% 0.045 0.9862.96 1.47 24 14130100%1
5KAG_YE1_G_501 99% 18% 0.028 0.9932.18 1.29 11 950100%1
5KAH_YE1_F_501 98% 20% 0.033 0.9932.05 1.33 12 1260100%1
2NP9_YE1_B_999 47% 12% 0.13 0.9121.99 2.07 11 13120100%1
2PG8_YE1_C_999 33% 12% 0.147 0.8691.98 2.09 11 11160100%1