Ligand validation:4YDK

PEG: DI(HYDROXYETHYL)ETHER

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YDK_PEG_G_514	19%	77%	0.179	0.838	0.55	0.3	-	-	0	0	100%	1
4YDK_PEG_L_301	10%	73%	0.232	0.849	0.55	0.37	-	-	0	0	100%	1
4YDK_PEG_G_511	5%	78%	0.259	0.815	0.54	0.28	-	-	0	0	100%	1
4YDK_PEG_L_302	3%	73%	0.277	0.8	0.53	0.39	-	-	0	0	100%	1
4YDK_PEG_H_301	3%	73%	0.283	0.81	0.58	0.35	-	-	0	0	100%	1
4YDK_PEG_G_513	3%	76%	0.219	0.698	0.54	0.32	-	-	0	0	100%	1
4YDK_PEG_G_512	2%	79%	0.24	0.689	0.55	0.26	-	-	1	0	100%	1
8GD3_PEG_A_513	30%	97%	0.129	0.822	0.17	0.2	-	-	1	0	100%	1
4LSP_PEG_G_520	10%	53%	0.195	0.791	0.66	0.96	-	1	0	0	100%	1
4YDJ_PEG_B_305	5%	69%	0.261	0.824	0.54	0.48	-	-	0	0	100%	1
6O63_PEG_D_401	100%	76%	0.019	0.996	0.57	0.29	-	-	0	0	100%	1
4BPT_PEG_B_1260	100%	51%	0.02	0.996	1.02	0.72	-	-	12	0	100%	1
9HDE_PEG_A_402	100%	94%	0.021	0.995	0.22	0.21	-	-	0	0	100%	1
5AG3_PEG_A_1347	100%	68%	0.022	0.994	0.81	0.28	-	-	0	0	100%	1
8OOQ_PEG_P_502	100%	100%	0.024	0.997	0.12	0.07	-	-	0	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.