4YDI | pdb_00004ydi


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 4YDI designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YDI_NAG_G_507 69% 74% 0.089 0.9030.33 0.56 - -00100%1
4YDI_NAG_G_503 60% 74% 0.092 0.8770.27 0.62 - 100100%1
4YDI_NAG_G_504 47% 76% 0.12 0.8580.36 0.48 - -10100%1
4YDI_NAG_G_505 45% 79% 0.093 0.8180.19 0.58 - -00100%1
4YDI_NAG_G_508 42% 85% 0.081 0.7950.22 0.45 - -00100%1
4YDI_NAG_G_501 31% 86% 0.086 0.7470.26 0.4 - -00100%1
4YDI_NAG_G_506 28% 84% 0.118 0.770.34 0.37 - -00100%1
4YDI_NAG_G_512 20% 80% 0.132 0.7350.27 0.49 - -00100%1
4YDI_NAG_L_301 15% 82% 0.109 0.670.26 0.47 - -00100%1
4YDI_NAG_G_511 14% 76% 0.149 0.70.35 0.49 - -00100%1
4YDI_NAG_G_510 9% 85% 0.125 0.6130.28 0.4 - -00100%1
4YDI_NAG_G_502 4% 77% 0.096 0.464 0.27 0.54 - -00100%1
4YDI_NAG_G_509 3% 69% 0.119 0.451 0.45 0.59 - -20100%1
4J6R_NAG_G_503 81% 60% 0.071 0.9270.49 0.88 - 100100%1
2QFR_NAG_B_451 100% 64% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 66% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 62% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_C_704 100% 59% 0.019 0.9940.45 0.96 - -00100%1