4V9C
NMY: NEOMYCIN
NMY is a Ligand Of Interest in 4V9C designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4V9C_NMY_DA_3188 | 44% | 11% | 0.208 | 0.937 | 2.2 | 2 | 13 | 24 | 3 | 0 | 100% | 0.79 |
4V9C_NMY_DA_3185 | 36% | 12% | 0.219 | 0.913 | 2.32 | 1.73 | 13 | 16 | 4 | 0 | 100% | 0.73 |
4V9C_NMY_AA_1655 | 34% | 59% | 0.208 | 0.893 | 0.58 | 0.98 | - | 4 | 17 | 0 | 100% | 0.93 |
4V9C_NMY_CA_1672 | 33% | 62% | 0.244 | 0.923 | 0.54 | 0.91 | - | 2 | 3 | 0 | 100% | 0.73 |
4V9C_NMY_DA_3189 | 33% | 9% | 0.229 | 0.907 | 2.2 | 2.3 | 12 | 24 | 5 | 0 | 100% | 0.64 |
4V9C_NMY_DA_3186 | 26% | 8% | 0.268 | 0.91 | 2.36 | 2.32 | 12 | 16 | 13 | 0 | 100% | 0.66 |
4V9C_NMY_DA_3184 | 23% | 53% | 0.251 | 0.877 | 0.58 | 1.24 | - | 5 | 12 | 0 | 100% | 0.73 |
4V9C_NMY_BA_3166 | 22% | 9% | 0.249 | 0.864 | 2.18 | 2.32 | 10 | 17 | 11 | 0 | 100% | 0.73 |
4V9C_NMY_BA_3161 | 21% | 60% | 0.248 | 0.859 | 0.51 | 1.01 | - | 4 | 4 | 0 | 100% | 0.71 |
4V9C_NMY_BA_3162 | 18% | 59% | 0.259 | 0.846 | 0.51 | 1.04 | - | 5 | 12 | 0 | 100% | 0.78 |
4V9C_NMY_DA_3187 | 17% | 15% | 0.319 | 0.896 | 2.3 | 1.51 | 11 | 14 | 2 | 0 | 100% | 0.83 |
4V9C_NMY_AA_1656 | 13% | 12% | 0.298 | 0.842 | 2.27 | 1.86 | 12 | 20 | 2 | 0 | 100% | 0.74 |
4V9C_NMY_BA_3165 | 11% | 57% | 0.298 | 0.823 | 0.54 | 1.11 | - | 5 | 8 | 0 | 100% | 0.7 |
4V9C_NMY_AA_1657 | 11% | 11% | 0.279 | 0.799 | 2.32 | 1.83 | 13 | 18 | 1 | 0 | 100% | 0.59 |
4V9C_NMY_BA_3163 | 11% | 8% | 0.295 | 0.811 | 2.3 | 2.41 | 10 | 27 | 8 | 0 | 100% | 0.64 |
4V9C_NMY_BA_3164 | 10% | 8% | 0.329 | 0.834 | 2.25 | 2.38 | 11 | 26 | 3 | 0 | 100% | 0.73 |
4V9C_NMY_BA_3167 | 9% | 11% | 0.31 | 0.796 | 2.28 | 1.93 | 11 | 14 | 1 | 0 | 100% | 0.73 |
4V9C_NMY_DA_3190 | 2% | 7% | 0.421 | 0.723 | 2.29 | 2.54 | 11 | 26 | 11 | 0 | 100% | 0.57 |
4V57_NMY_CA_1601 | 33% | 23% | 0.216 | 0.895 | 2.03 | 1.19 | 13 | 6 | 0 | 0 | 100% | 0.9 |
4V52_NMY_CA_1601 | 26% | 21% | 0.247 | 0.892 | 2.02 | 1.29 | 12 | 8 | 0 | 0 | 100% | 0.9 |
6P06_NMY_A_305 | 76% | 6% | 0.118 | 0.954 | 4.01 | 1.21 | 17 | 5 | 2 | 0 | 100% | 1 |
6NMM_NMY_A_800 | 72% | 6% | 0.14 | 0.965 | 4.05 | 1.09 | 17 | 3 | 0 | 0 | 100% | 1 |
6MB5_NMY_A_301 | 70% | 7% | 0.105 | 0.921 | 3.79 | 1.08 | 15 | 3 | 0 | 0 | 100% | 1 |
5IQE_NMY_D_600 | 63% | 56% | 0.156 | 0.953 | 0.35 | 1.32 | - | 8 | 1 | 0 | 100% | 1 |
7CS1_NMY_A_301 | 62% | 57% | 0.128 | 0.918 | 0.55 | 1.09 | - | 4 | 0 | 0 | 100% | 1 |