4V82 | pdb_00004v82


DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 4V82 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4V82_DGD_BC_5517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4V82_DGD_BC_5517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4V82_DGD_BC_5517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4V82_DGD_BC_5517 14% 11% 0.277 0.8671.44 2.74 8 22 10080%1
4V82_DGD_AH_101 13% 19% 0.302 0.8621.33 2.1 9 18 11088%1
4V82_DGD_AC_519 8% 7% 0.358 0.8381.49 3.36 13 30 421100%1
4V82_DGD_BC_5519 6% 6% 0.36 0.8011.53 3.36 12 30 451100%1
4V82_DGD_BH_5101 6% 19% 0.374 0.8331.31 2.11 9 1710088%1
4V82_DGD_AC_517 4% 11% 0.389 0.8191.35 2.74 7 22 10080%1
4V82_DGD_AC_518 3% 12% 0.408 0.7611.23 2.8 6 23 13194%1
4V82_DGD_BC_5518 1% 12% 0.49 0.7021.26 2.78 6 22 11194%1
4V82_DGD_AA_411 0% 5% 0.539 0.562 1.8 3.62 13 24 11085%1
4V82_DGD_BB_5602 0% 17% 0.529 0.506 1.5 2.08 7 135079%1
4V82_DGD_BA_5412 0% 4% 0.579 0.532 1.83 3.63 13 23 11085%1
4V82_DGD_AB_628 0% 18% 0.598 0.55 1.45 2.05 7 140079%1
4V82_DGD_BE_5102 0% 27% 0.698 0.444 1.52 1.43 14 111095%1
4V82_DGD_AE_101 0% 26% 0.715 0.362 1.55 1.45 13 121095%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
3WU2_DGD_C_518 92% 45% 0.063 0.9650.79 1.31 3 90094%1
7YQ7_DGD_C_518 87% 51% 0.084 0.9670.83 1.07 3 50094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1