GPP: GERANYL DIPHOSPHATE
GPP is a Ligand Of Interest in 4TQ3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4TQ3_GPP_A_401 | 83% | 43% | 0.115 | 0.974 | 0.51 | 1.65 | - | 4 | 1 | 0 | 100% | 1 |
4TQ3_GPP_B_401 | 75% | 45% | 0.137 | 0.971 | 0.54 | 1.56 | - | 5 | 1 | 0 | 100% | 1 |
4TQ3_GPP_D_401 | 73% | 43% | 0.137 | 0.965 | 0.5 | 1.67 | - | 6 | 1 | 0 | 100% | 1 |
4TQ3_GPP_C_401 | 62% | 46% | 0.168 | 0.961 | 0.49 | 1.56 | - | 4 | 0 | 0 | 100% | 1 |
2VG3_GPP_B_1298 | 100% | 7% | 0.05 | 0.994 | 2.78 | 2.12 | 3 | 5 | 0 | 0 | 100% | 1 |
4K7T_GPP_A_101 | 97% | 51% | 0.069 | 0.985 | 0.87 | 1.02 | 1 | - | 0 | 0 | 100% | 1 |
8A78_GPP_A_505 | 95% | 67% | 0.069 | 0.971 | 0.58 | 0.7 | - | - | 1 | 0 | 100% | 1 |
8A73_GPP_A_505 | 93% | 67% | 0.075 | 0.971 | 0.56 | 0.71 | - | - | 0 | 0 | 100% | 1 |
6PGN_GPP_A_402 | 91% | 55% | 0.085 | 0.973 | 0.68 | 1.04 | - | - | 2 | 0 | 100% | 1 |