Ligand validation:4RKU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4RKU_CLA_B_1239	64%	6%	0.099	0.94	2.28	2.77	18	29	21	1	100%	1
4RKU_CLA_B_9010	63%	7%	0.104	0.945	2.29	2.58	20	28	26	1	100%	1
4RKU_CLA_B_1226	63%	7%	0.104	0.942	2.24	2.64	19	25	19	1	100%	1
4RKU_CLA_B_1205	58%	7%	0.114	0.937	2.36	2.51	22	25	9	1	100%	1
4RKU_CLA_B_1235	57%	7%	0.113	0.932	2.35	2.49	22	25	11	1	100%	1
4RKU_CLA_B_1225	56%	7%	0.118	0.932	2.38	2.41	22	25	9	1	100%	1
4RKU_CLA_B_1238	55%	7%	0.117	0.927	2.37	2.46	22	25	3	1	100%	1
4RKU_CLA_B_1204	55%	5%	0.1	0.933	2.56	2.62	22	25	2	1	85%	1
4RKU_CLA_B_1203	54%	6%	0.113	0.932	2.45	2.53	22	23	4	1	92%	1
4RKU_CLA_B_1201	52%	4%	0.087	0.931	2.83	2.74	23	23	3	1	71%	1
4RKU_CLA_B_1220	52%	7%	0.13	0.933	2.38	2.47	22	27	10	1	100%	1
4RKU_CLA_B_1228	52%	5%	0.097	0.928	2.54	2.83	22	25	12	1	78%	1
4RKU_CLA_A_1131	51%	7%	0.119	0.912	2.27	2.54	19	25	11	1	100%	1
4RKU_CLA_A_1132	51%	7%	0.123	0.917	2.3	2.46	19	27	19	1	100%	1
4RKU_CLA_A_1138	50%	7%	0.127	0.92	2.37	2.47	22	25	8	1	100%	1
4RKU_CLA_B_1227	49%	7%	0.117	0.898	2.25	2.65	19	26	25	1	100%	1
4RKU_CLA_B_1202	49%	7%	0.133	0.924	2.36	2.48	22	23	6	1	100%	1
4RKU_CLA_B_1229	48%	7%	0.137	0.929	2.36	2.46	23	23	8	1	100%	1
4RKU_CLA_1_1004	48%	7%	0.125	0.906	2.31	2.47	19	24	33	1	100%	1
4RKU_CLA_B_1206	48%	7%	0.134	0.921	2.35	2.48	21	28	13	1	100%	1
4RKU_CLA_B_9023	48%	7%	0.125	0.905	2.31	2.53	21	32	21	1	100%	1
4RKU_CLA_B_1211	47%	7%	0.123	0.9	2.37	2.48	22	26	2	1	100%	1
4RKU_CLA_B_9022	47%	7%	0.128	0.908	2.42	2.44	22	32	9	1	100%	1
4RKU_CLA_B_1207	47%	7%	0.126	0.903	2.36	2.53	21	26	18	1	100%	1
4RKU_CLA_A_1139	47%	7%	0.13	0.908	2.37	2.44	22	24	5	1	100%	1
4RKU_CLA_A_1102	46%	4%	0.099	0.909	2.67	2.81	23	24	6	1	77%	1
4RKU_CLA_A_1101	46%	7%	0.132	0.91	2.36	2.51	22	23	8	1	100%	1
4RKU_CLA_4_4012	46%	6%	0.135	0.912	2.3	2.62	21	27	51	1	100%	1
4RKU_CLA_B_1240	45%	6%	0.123	0.89	2.28	2.63	20	33	23	1	100%	1
4RKU_CLA_B_1223	45%	7%	0.136	0.91	2.36	2.51	21	26	4	1	100%	1
4RKU_CLA_B_1216	44%	7%	0.127	0.892	2.36	2.4	21	25	5	1	100%	1
4RKU_CLA_4_4003	44%	8%	0.118	0.876	2.27	2.34	19	27	52	1	100%	1
4RKU_CLA_B_1222	44%	7%	0.138	0.909	2.36	2.49	22	27	8	1	100%	1
4RKU_CLA_1_1005	42%	6%	0.113	0.889	2.41	2.72	19	26	29	1	86%	1
4RKU_CLA_4_4004	41%	7%	0.137	0.892	2.26	2.6	20	28	54	1	100%	1
4RKU_CLA_B_1236	41%	5%	0.133	0.921	2.54	2.67	21	24	5	1	85%	1
4RKU_CLA_A_1140	41%	7%	0.138	0.893	2.39	2.45	22	24	7	1	100%	1
4RKU_CLA_A_1105	40%	5%	0.113	0.9	2.66	2.75	23	25	3	1	78%	1
4RKU_CLA_B_1210	40%	7%	0.149	0.91	2.39	2.48	22	26	4	1	100%	1
4RKU_CLA_B_1214	40%	6%	0.141	0.918	2.46	2.61	22	24	6	1	91%	1
4RKU_CLA_F_1303	40%	8%	0.134	0.887	2.33	2.37	20	29	29	1	98%	1
4RKU_CLA_A_1130	40%	4%	0.115	0.92	2.81	2.7	22	23	16	1	71%	1
4RKU_CLA_A_1124	40%	5%	0.125	0.904	2.56	2.64	22	25	7	1	85%	1
4RKU_CLA_B_1224	40%	7%	0.153	0.913	2.37	2.47	22	24	11	1	100%	1
4RKU_CLA_B_1221	40%	5%	0.135	0.922	2.57	2.72	21	24	3	1	83%	1
4RKU_CLA_A_9013	39%	6%	0.152	0.91	2.28	2.66	19	31	16	1	100%	1
4RKU_CLA_B_1230	39%	5%	0.136	0.905	2.47	2.67	22	26	5	1	89%	1
4RKU_CLA_4_4013	38%	4%	0.107	0.88	2.54	2.89	19	27	17	1	78%	1
4RKU_CLA_L_1502	38%	7%	0.148	0.897	2.34	2.5	22	25	10	1	100%	1
4RKU_CLA_A_1117	38%	7%	0.166	0.926	2.38	2.42	22	25	8	1	100%	1
4RKU_CLA_4_4009	38%	4%	0.12	0.902	2.51	2.94	18	24	12	1	77%	1
4RKU_CLA_4_4011	37%	7%	0.148	0.893	2.26	2.6	21	26	35	1	100%	1
4RKU_CLA_A_1135	37%	4%	0.121	0.898	2.64	2.79	22	25	5	0	78%	1
4RKU_CLA_A_1103	37%	7%	0.157	0.908	2.36	2.44	22	25	9	1	100%	1
4RKU_CLA_A_1122	37%	6%	0.135	0.892	2.49	2.64	21	25	9	1	91%	1
4RKU_CLA_A_1125	37%	5%	0.129	0.896	2.45	2.84	19	28	20	1	85%	1
4RKU_CLA_L_1501	37%	4%	0.109	0.893	2.8	2.72	21	22	31	1	71%	1
4RKU_CLA_B_1234	37%	6%	0.142	0.897	2.47	2.54	22	25	6	1	92%	1
4RKU_CLA_A_1127	36%	7%	0.162	0.912	2.37	2.43	22	24	3	1	100%	1
4RKU_CLA_1_1001	36%	5%	0.13	0.894	2.48	2.8	19	29	68	1	85%	1
4RKU_CLA_B_1209	36%	4%	0.118	0.906	2.83	2.7	22	23	9	1	71%	1
4RKU_CLA_B_1218	35%	6%	0.143	0.893	2.45	2.63	22	24	3	1	92%	1
4RKU_CLA_A_1106	35%	7%	0.156	0.896	2.35	2.5	22	26	12	1	100%	1
4RKU_CLA_1_1003	35%	7%	0.136	0.861	2.31	2.57	18	30	61	1	100%	1
4RKU_CLA_A_9012	34%	7%	0.16	0.895	2.33	2.49	20	28	20	1	100%	1
4RKU_CLA_A_1123	32%	7%	0.168	0.9	2.38	2.5	23	25	9	1	100%	1
4RKU_CLA_A_1104	32%	7%	0.173	0.907	2.35	2.5	22	24	7	1	100%	1
4RKU_CLA_2_2012	31%	7%	0.148	0.863	2.24	2.55	19	26	30	1	100%	1
4RKU_CLA_B_1208	31%	5%	0.14	0.885	2.57	2.62	22	24	8	1	85%	1
4RKU_CLA_B_1231	31%	4%	0.11	0.866	2.83	2.74	22	24	3	1	71%	1
4RKU_CLA_A_1129	31%	5%	0.134	0.892	2.65	2.76	21	25	25	1	77%	1
4RKU_CLA_B_1237	31%	6%	0.148	0.878	2.45	2.55	21	24	3	1	92%	1
4RKU_CLA_A_1137	30%	5%	0.164	0.92	2.55	2.67	21	28	9	1	85%	1
4RKU_CLA_1_1008	30%	7%	0.147	0.853	2.27	2.53	22	26	43	1	100%	1
4RKU_CLA_2_2013	30%	7%	0.131	0.825	2.22	2.61	19	31	30	1	100%	1
4RKU_CLA_B_1215	29%	6%	0.164	0.896	2.45	2.51	21	25	6	1	92%	1
4RKU_CLA_A_1111	28%	6%	0.162	0.887	2.45	2.61	22	25	7	1	92%	1
4RKU_CLA_B_1219	28%	6%	0.164	0.888	2.45	2.49	22	25	7	1	92%	1
4RKU_CLA_A_1116	28%	5%	0.162	0.906	2.58	2.66	23	24	3	1	83%	1
4RKU_CLA_1_1007	27%	5%	0.14	0.864	2.48	2.8	21	30	25	1	85%	1
4RKU_CLA_F_1301	27%	4%	0.131	0.884	2.69	2.74	20	22	4	1	69%	1
4RKU_CLA_B_1213	27%	6%	0.155	0.87	2.35	2.63	19	29	39	1	92%	1
4RKU_CLA_2_2005	27%	7%	0.153	0.848	2.23	2.59	19	27	31	1	100%	1
4RKU_CLA_B_1217	27%	4%	0.141	0.895	2.83	2.71	21	23	5	1	71%	1
4RKU_CLA_A_1109	26%	7%	0.166	0.866	2.36	2.49	22	25	11	1	100%	1
4RKU_CLA_1_1012	26%	5%	0.144	0.883	2.53	2.81	19	27	25	1	77%	1
4RKU_CLA_A_1119	26%	7%	0.182	0.888	2.36	2.42	22	24	2	1	100%	1
4RKU_CLA_4_4015	25%	4%	0.132	0.869	2.75	2.77	17	27	23	1	71%	1
4RKU_CLA_A_1128	25%	7%	0.177	0.875	2.32	2.5	20	26	19	1	100%	1
4RKU_CLA_A_1136	24%	7%	0.174	0.866	2.37	2.51	22	26	15	1	100%	1
4RKU_CLA_F_1302	22%	4%	0.131	0.847	2.84	2.67	22	21	1	1	71%	1
4RKU_CLA_4_4008	22%	3%	0.127	0.832	2.63	3.24	18	29	44	1	74%	1
4RKU_CLA_A_1113	21%	4%	0.151	0.878	2.84	2.71	22	21	1	1	71%	1
4RKU_CLA_2_2004	21%	5%	0.16	0.844	2.51	2.69	21	25	45	1	91%	1
4RKU_CLA_A_1133	19%	4%	0.154	0.87	2.73	2.8	20	25	5	1	71%	1
4RKU_CLA_A_1134	19%	4%	0.14	0.846	2.85	2.72	22	22	0	1	71%	1
4RKU_CLA_A_1112	19%	4%	0.148	0.858	2.84	2.72	23	23	1	1	71%	1
4RKU_CLA_L_1503	19%	5%	0.146	0.836	2.64	2.77	21	25	23	1	77%	1
4RKU_CLA_1_1002	18%	5%	0.156	0.825	2.5	2.79	18	27	96	1	86%	1
4RKU_CLA_A_1118	18%	4%	0.159	0.866	2.81	2.84	21	25	3	1	71%	1
4RKU_CLA_A_1114	17%	4%	0.141	0.833	2.86	2.7	22	21	4	1	71%	1
4RKU_CLA_B_1212	17%	4%	0.143	0.835	2.84	2.71	22	23	2	1	71%	1
4RKU_CLA_A_1108	16%	4%	0.141	0.819	2.84	2.71	22	23	4	1	71%	1
4RKU_CLA_1_1011	15%	6%	0.19	0.828	2.22	2.77	19	31	23	1	100%	1
4RKU_CLA_G_1001	15%	4%	0.132	0.765	2.42	3	19	29	25	1	85%	1
4RKU_CLA_G_1002	14%	4%	0.142	0.808	2.67	2.89	19	27	57	1	71%	1
4RKU_CLA_A_1121	14%	4%	0.153	0.823	2.81	2.77	22	20	2	1	71%	1
4RKU_CLA_2_2001	13%	2%	0.145	0.87	3.25	3.23	16	15	22	1	42%	1
4RKU_CLA_A_1126	12%	7%	0.236	0.881	2.37	2.48	23	26	11	1	100%	1
4RKU_CLA_4_4002	12%	4%	0.162	0.785	2.39	3.03	20	26	60	1	86%	1
4RKU_CLA_A_1107	11%	4%	0.194	0.851	2.67	2.79	22	28	7	1	78%	1
4RKU_CLA_2_2011	11%	6%	0.178	0.79	2.37	2.7	20	27	33	1	92%	1
4RKU_CLA_A_1115	11%	6%	0.179	0.803	2.55	2.59	23	24	9	1	86%	1
4RKU_CLA_4_4001	11%	6%	0.187	0.78	2.34	2.58	20	29	56	1	100%	1
4RKU_CLA_H_1000	10%	4%	0.162	0.803	2.83	2.79	21	24	5	1	71%	1
4RKU_CLA_4_4010	10%	4%	0.164	0.786	2.58	2.97	18	31	12	1	77%	1
4RKU_CLA_A_1141	9%	5%	0.156	0.755	2.68	2.72	22	26	5	1	78%	1
4RKU_CLA_4_4014	8%	5%	0.158	0.762	2.66	2.75	18	26	43	1	69%	1
4RKU_CLA_1_1010	7%	7%	0.196	0.75	2.24	2.54	19	26	47	1	100%	1
4RKU_CLA_2_2009	7%	4%	0.155	0.748	2.74	2.81	19	23	34	1	71%	1
4RKU_CLA_1_1009	6%	6%	0.209	0.749	2.34	2.71	22	31	92	1	100%	1
4RKU_CLA_2_2002	6%	6%	0.185	0.726	2.34	2.75	20	28	59	1	92%	1
4RKU_CLA_2_2007	5%	6%	0.184	0.727	2.42	2.66	19	28	8	1	85%	1
4RKU_CLA_2_2010	5%	7%	0.167	0.648	2.31	2.45	18	24	27	1	100%	1
4RKU_CLA_A_1120	4%	4%	0.181	0.713	2.85	2.7	22	21	2	1	71%	1
4RKU_CLA_3_3008	3%	7%	0.171	0.622	2.25	2.59	20	24	32	1	100%	1
4RKU_CLA_3_3009	3%	3%	0.204	0.741	2.77	2.99	20	26	38	1	71%	1
4RKU_CLA_3_3011	2%	4%	0.176	0.659	2.77	2.92	20	26	45	1	71%	1
4RKU_CLA_1_1013	2%	6%	0.194	0.62	2.27	2.69	19	31	92	1	100%	1
4RKU_CLA_3_3012	2%	3%	0.188	0.682	2.59	3.15	19	28	47	1	69%	1
4RKU_CLA_A_1110	2%	5%	0.27	0.78	2.54	2.61	21	27	3	1	85%	1
4RKU_CLA_3_3013	2%	4%	0.192	0.664	2.6	2.84	21	24	25	1	77%	1
4RKU_CLA_4_4006	1%	5%	0.227	0.615	2.18	2.96	18	34	24	1	100%	1
4RKU_CLA_3_3002	1%	5%	0.204	0.612	2.57	2.74	22	26	5	1	85%	1
4RKU_CLA_2_2003	1%	6%	0.188	0.525	2.32	2.71	22	26	61	1	100%	1
4RKU_CLA_J_1302	1%	6%	0.224	0.585	2.47	2.5	22	24	1	1	94%	1
4RKU_CLA_1_1006	1%	4%	0.209	0.606	2.69	2.89	19	25	69	1	72%	1
4RKU_CLA_2_2014	1%	4%	0.183	0.561	2.6	3.04	19	24	20	1	69%	1
4RKU_CLA_A_1143	1%	4%	0.178	0.546	2.71	2.74	21	21	0	1	71%	1
4RKU_CLA_3_3010	1%	5%	0.191	0.535	2.5	2.88	21	29	27	1	80%	1
4RKU_CLA_3_3017	1%	4%	0.194	0.559	2.71	2.86	21	22	3	1	69%	1
4RKU_CLA_3_3001	1%	7%	0.279	0.617	2.34	2.56	22	26	25	1	100%	1
4RKU_CLA_3_3014	1%	4%	0.239	0.58	2.64	2.95	20	23	5	1	69%	1
4RKU_CLA_2_2008	0%	6%	0.218	0.464	2.31	2.71	18	32	32	1	100%	1
4RKU_CLA_1_1014	0%	4%	0.203	0.508	2.65	2.89	20	25	36	1	69%	1
4RKU_CLA_4_4005	0%	3%	0.251	0.572	2.57	3.29	22	32	57	1	69%	1
4RKU_CLA_2_2006	0%	5%	0.204	0.44	2.47	2.67	20	22	27	1	88%	1
4RKU_CLA_3_3003	0%	6%	0.272	0.538	2.42	2.64	22	26	13	1	92%	1
4RKU_CLA_3_3016	0%	4%	0.163	0.358	2.73	2.74	21	22	0	1	69%	1
4RKU_CLA_A_1142	0%	4%	0.182	0.392	2.74	2.79	21	22	0	1	68%	1
4RKU_CLA_J_6014	0%	6%	0.196	0.35	2.45	2.53	23	23	7	1	94%	1
4RKU_CLA_3_3006	0%	7%	0.273	0.445	2.38	2.44	22	26	4	1	100%	1
4RKU_CLA_J_6015	0%	5%	0.227	0.408	2.54	2.65	21	23	15	1	85%	1
4RKU_CLA_4_4007	0%	7%	0.269	0.441	2.31	2.49	20	21	24	1	100%	1
4RKU_CLA_3_3015	0%	4%	0.177	0.308	2.72	2.74	21	21	0	1	69%	1
4RKU_CLA_3_3004	0%	4%	0.275	0.3	2.71	2.76	21	21	0	1	69%	1
4RKU_CLA_3_3005	0%	4%	0.247	0.243	2.72	2.78	21	22	4	1	69%	1
7DKZ_CLA_B_828	82%	32%	0.071	0.971	1.23	1.44	8	13	2	1	100%	1
2O01_CLA_B_1209	81%	5%	0.056	0.981	2.35	2.8	16	26	50	2	85%	1
4XK8_CLA_b_803	79%	9%	0.072	0.963	2.05	2.47	20	30	8	1	100%	1
5L8R_CLA_A_839	78%	26%	0.078	0.969	1.35	1.64	6	12	7	1	100%	1
4Y28_CLA_B_1235	69%	7%	0.094	0.955	2.36	2.53	21	24	10	1	100%	1
7M76_CLA_B_3041	100%	33%	0.015	0.999	1.25	1.37	7	8	4	1	100%	1
8OW6_CLA_B_601	100%	41%	0.016	0.998	1.2	1.02	12	4	0	1	100%	1
6PGK_CLA_G_842	100%	9%	0.024	0.997	2.21	2.22	21	25	9	1	100%	1
1VF5_CLA_B_201	97%	14%	0.039	0.993	1.61	2.22	9	17	9	3	100%	1
5V2C_CLA_d_403	97%	15%	0.034	0.984	1.7	2.01	14	23	4	1	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

4RKU | pdb_00004rku

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB