TYD: THYMIDINE-5'-DIPHOSPHATE

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TYD is a Ligand Of Interest in 4MZU designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4MZU_TYD_E_402 71% 13% 0.093 0.9141.47 2.4 6 1540100%1
4MZU_TYD_K_402 71% 17% 0.089 0.9091.41 2.05 5 1400100%1
4MZU_TYD_B_402 67% 13% 0.096 0.9041.45 2.33 5 900100%1
4MZU_TYD_I_402 59% 11% 0.101 0.8821.38 2.67 3 1100100%1
4MZU_TYD_A_402 58% 16% 0.103 0.881.45 2.09 4 1000100%1
4MZU_TYD_F_402 50% 14% 0.118 0.8661.45 2.31 5 1420100%1
4MZU_TYD_D_402 47% 12% 0.115 0.851.45 2.47 5 1320100%1
4MZU_TYD_L_402 42% 16% 0.123 0.841.38 2.18 4 1310100%1
4MZU_TYD_H_401 42% 20% 0.135 0.8521.48 1.81 5 810100%1
4MZU_TYD_C_402 41% 10% 0.13 0.8431.37 2.8 4 1200100%1
4MZU_TYD_G_402 30% 11% 0.14 0.8041.45 2.58 4 1610100%1
4MZU_TYD_J_402 25% 13% 0.149 0.7841.49 2.35 4 1000100%1
2PAM_TYD_B_140 100% 31% 0.019 0.9971.5 1.17 1 510100%1
5TPU_TYD_A_200 100% 21% 0.022 0.9951.32 1.86 3 1400100%1
3EVO_TYD_A_160 100% 21% 0.036 0.991.41 1.81 4 700100%1
3OTI_TYD_A_377 100% 22% 0.035 0.9891.32 1.78 3 900100%1
1PN3_TYD_A_406 99% 53% 0.04 0.9910.96 0.74 1 150100%1