4DEC | pdb_00004dec


UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 4DEC designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4DEC_UDP_A_401 74% 29% 0.098 0.9321.03 1.7 1 700100%1
5JUC_UDP_A_401 80% 72% 0.103 0.9560.46 0.49 - 100100%1
5JT0_UDP_A_402 75% 68% 0.118 0.9550.5 0.58 - -10100%0.92
3E25_UDP_A_339 37% 5% 0.222 0.9283.32 2.06 8 1260100%0.66
5JUD_UDP_A_401 4% 4% 0.393 0.7943.85 1.81 12 910100%0.48
4DE7_UDP_A_401 1% 27% 0.499 0.7520.8 2 - 60064%0.59
8X3Q_UDP_D_401 100% 3% 0.013 0.9993.3 2.73 13 1400100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_B_704 100% 57% 0.03 0.9940.59 0.91 - 100100%1
2B69_UDP_A_900 100% 40% 0.032 0.9921.03 1.21 2 400100%1
4GYW_UDP_C_1101 99% 34% 0.037 0.9881.03 1.45 2 400100%1