GDD: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE
GDD is a Ligand Of Interest in 3OKA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3OKA_GDD_A_701 | 13% | 5% | 0.224 | 0.819 | 4.06 | 1.3 | 9 | 5 | 0 | 0 | 72% | 0.5385 |
| 3OKA_GDD_B_701 | 9% | 5% | 0.258 | 0.799 | 4.06 | 1.32 | 9 | 3 | 0 | 0 | 72% | 0.5385 |
| 3OKP_GDD_A_601 | 19% | 9% | 0.197 | 0.84 | 3.26 | 1.29 | 7 | 5 | 1 | 0 | 72% | 0.359 |
| 8SG0_GDD_A_404 | 98% | 35% | 0.062 | 0.985 | 0.97 | 1.59 | 2 | 8 | 3 | 0 | 100% | 0.57 |
| 6GPK_GDD_C_408 | 98% | 57% | 0.064 | 0.984 | 0.96 | 0.69 | 1 | - | 0 | 0 | 100% | 1 |
| 2C5E_GDD_B_1372 | 98% | 42% | 0.069 | 0.988 | 1.07 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 2PK3_GDD_B_411 | 93% | 39% | 0.079 | 0.974 | 1.2 | 1.18 | 1 | 6 | 0 | 0 | 100% | 1 |
| 2C59_GDD_A_1377 | 87% | 42% | 0.108 | 0.982 | 0.91 | 1.35 | 1 | 7 | 1 | 0 | 100% | 0.5 |
