3NGB | pdb_00003ngb


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 3NGB designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3NGB_NAG_A_510 84% 63% 0.054 0.9520.56 0.68 - -00100%1
3NGB_NAG_D_502 78% 66% 0.062 0.940.53 0.6 - -00100%1
3NGB_NAG_D_510 77% 63% 0.061 0.9360.56 0.65 - -00100%1
3NGB_NAG_A_502 77% 62% 0.073 0.9550.52 0.76 - -00100%1
3NGB_NAG_A_501 75% 62% 0.065 0.9310.54 0.74 - -00100%1
3NGB_NAG_D_504 74% 61% 0.076 0.9480.59 0.7 - -00100%1
3NGB_NAG_G_504 73% 54% 0.078 0.9460.53 1.07 - 100100%1
3NGB_NAG_A_504 73% 56% 0.071 0.9330.55 0.93 - 100100%1
3NGB_NAG_D_507 70% 64% 0.064 0.9090.56 0.64 - -10100%1
3NGB_NAG_G_502 67% 64% 0.077 0.9160.53 0.67 - -00100%1
3NGB_NAG_I_509 66% 63% 0.071 0.90.55 0.66 - -00100%1
3NGB_NAG_I_504 64% 62% 0.096 0.9360.54 0.73 - -00100%1
3NGB_NAG_G_510 63% 64% 0.072 0.8910.54 0.64 - -00100%1
3NGB_NAG_D_506 62% 65% 0.082 0.9030.55 0.6 - -00100%1
3NGB_NAG_D_511 56% 63% 0.084 0.8750.54 0.69 - -00100%1
3NGB_NAG_G_509 55% 64% 0.108 0.9120.58 0.62 - -00100%1
3NGB_NAG_I_507 52% 68% 0.081 0.8530.54 0.53 - -00100%1
3NGB_NAG_G_506 52% 59% 0.084 0.8580.47 0.9 - 100100%1
3NGB_NAG_A_506 51% 59% 0.091 0.8640.53 0.85 - -00100%1
3NGB_NAG_G_507 48% 63% 0.095 0.8550.53 0.68 - -10100%1
3NGB_NAG_I_506 43% 58% 0.08 0.8070.49 0.93 - 110100%1
3NGB_NAG_A_507 41% 60% 0.104 0.8370.5 0.84 - -20100%1
3NGB_NAG_A_508 39% 66% 0.096 0.8140.53 0.59 - -00100%1
3NGB_NAG_D_512 39% 67% 0.089 0.80.54 0.54 - -00100%1
3NGB_NAG_G_511 37% 63% 0.101 0.8110.54 0.68 - -00100%1
3NGB_NAG_I_511 35% 40% 0.106 0.8110.59 1.64 - 200100%1
3NGB_NAG_A_511 34% 62% 0.089 0.7760.51 0.76 - -00100%1
3NGB_NAG_I_502 34% 62% 0.1 0.7940.5 0.76 - -00100%1
3NGB_NAG_G_505 29% 61% 0.111 0.7860.53 0.78 - 100100%1
3NGB_NAG_I_508 29% 66% 0.08 0.7330.56 0.55 - -00100%1
3NGB_NAG_A_512 28% 66% 0.086 0.7380.53 0.59 - -00100%1
3NGB_NAG_G_508 27% 63% 0.1 0.760.55 0.69 - -00100%1
3NGB_NAG_I_510 27% 60% 0.082 0.7250.52 0.81 - 100100%1
3NGB_NAG_A_505 22% 62% 0.131 0.7790.53 0.72 - 110100%1
3NGB_NAG_I_503 18% 68% 0.092 0.6880.54 0.52 - -00100%1
3NGB_NAG_D_505 17% 67% 0.109 0.7050.58 0.52 - -00100%1
3NGB_NAG_D_508 16% 62% 0.09 0.6680.53 0.72 - 100100%1
3NGB_NAG_A_503 16% 61% 0.103 0.6870.51 0.81 - -00100%1
3NGB_NAG_D_509 11% 64% 0.085 0.6070.54 0.64 - -00100%1
3NGB_NAG_I_505 5% 66% 0.132 0.6010.56 0.57 - -00100%1
3NGB_NAG_I_501 4% 56% 0.105 0.516 0.53 0.99 - 200100%1
3NGB_NAG_G_501 2% 68% 0.087 0.428 0.51 0.55 - -00100%1
3NGB_NAG_G_503 1% 64% 0.118 0.326 0.53 0.67 - -00100%1
3NGB_NAG_D_501 1% 65% 0.113 0.309 0.53 0.63 - -00100%1
3NGB_NAG_D_503 0% 66% 0.128 0.291 0.53 0.58 - -00100%1
3NGB_NAG_A_509 0% 68% 0.118 0.168 0.54 0.53 - -00100%1
5F9W_NAG_G_505 100% 84% 0.022 0.9940.21 0.5 - -00100%1
4YDL_NAG_A_503 99% 74% 0.028 0.9910.38 0.51 - -00100%1
7SX7_NAG_G_502 98% 57% 0.032 0.9860.67 0.78 - -00100%1
7SX6_NAG_A_507 98% 88% 0.035 0.9880.17 0.45 - -00100%1
4DKP_NAG_C_503 90% 59% 0.05 0.9690.44 0.92 - 100100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1