3KIC
D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
D5M is a Ligand Of Interest in 3KIC designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3KIC_D5M_J_999 | 51% | 42% | 0.191 | 0.945 | 0.92 | 1.3 | 1 | 3 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_P_999 | 45% | 43% | 0.191 | 0.924 | 0.91 | 1.3 | 1 | 2 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_C_999 | 44% | 43% | 0.216 | 0.945 | 0.91 | 1.3 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_Q_999 | 42% | 42% | 0.219 | 0.941 | 0.91 | 1.31 | 1 | 3 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_K_999 | 42% | 43% | 0.194 | 0.915 | 0.91 | 1.3 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_A_999 | 40% | 43% | 0.228 | 0.942 | 0.91 | 1.3 | 1 | 3 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_S_999 | 40% | 43% | 0.22 | 0.932 | 0.9 | 1.31 | 1 | 3 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_G_999 | 37% | 43% | 0.233 | 0.933 | 0.91 | 1.3 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_I_999 | 37% | 43% | 0.231 | 0.929 | 0.91 | 1.3 | 1 | 2 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_H_999 | 34% | 43% | 0.246 | 0.933 | 0.91 | 1.3 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_O_999 | 34% | 43% | 0.257 | 0.944 | 0.91 | 1.3 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_B_999 | 33% | 42% | 0.249 | 0.931 | 0.91 | 1.31 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_R_999 | 33% | 43% | 0.247 | 0.925 | 0.91 | 1.3 | 1 | 2 | 1 | 0 | 100% | 0.7 |
3KIC_D5M_L_999 | 32% | 42% | 0.265 | 0.94 | 0.91 | 1.31 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_F_999 | 31% | 43% | 0.257 | 0.93 | 0.91 | 1.3 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_D_999 | 31% | 42% | 0.233 | 0.905 | 0.92 | 1.3 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_T_999 | 23% | 42% | 0.3 | 0.924 | 0.91 | 1.31 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_N_999 | 22% | 42% | 0.279 | 0.899 | 0.91 | 1.31 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_M_999 | 22% | 42% | 0.313 | 0.933 | 0.91 | 1.31 | 1 | 3 | 2 | 0 | 100% | 0.7 |
3KIC_D5M_E_999 | 15% | 42% | 0.299 | 0.866 | 0.92 | 1.3 | 1 | 2 | 2 | 0 | 100% | 0.7 |
3KIE_D5M_T_999 | 20% | 46% | 0.29 | 0.893 | 0.93 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
6B42_D5M_A_201 | 98% | 52% | 0.066 | 0.986 | 0.82 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
8HCG_D5M_A_306 | 95% | 32% | 0.078 | 0.982 | 1.69 | 1.02 | 7 | 1 | 0 | 0 | 100% | 1 |
6JNL_D5M_C_101 | 89% | 60% | 0.09 | 0.977 | 0.72 | 0.82 | - | 1 | 0 | 0 | 95% | 0.9545 |
2IOC_D5M_B_303 | 85% | 11% | 0.091 | 0.955 | 2.81 | 1.38 | 2 | 1 | 0 | 0 | 100% | 1 |
6CGN_D5M_A_801 | 83% | 59% | 0.106 | 0.964 | 0.72 | 0.86 | - | 2 | 0 | 0 | 100% | 1 |