PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 3ZCV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3ZCV_PLP_A_1680 | 90% | 22% | 0.087 | 0.968 | 1.76 | 1.46 | 2 | 4 | 1 | 0 | 100% | 0.9375 |
5MCB_PLP_A_901 | 99% | 16% | 0.06 | 0.993 | 2.33 | 1.42 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
5O56_PLP_A_901 | 99% | 8% | 0.057 | 0.988 | 2.7 | 2.01 | 3 | 7 | 1 | 0 | 100% | 0.9375 |
6F3R_PLP_A_901 | 99% | 25% | 0.059 | 0.989 | 1.69 | 1.37 | 2 | 4 | 0 | 0 | 100% | 0.9375 |
6S4H_PLP_A_903 | 99% | 60% | 0.06 | 0.99 | 0.63 | 0.88 | - | - | 0 | 0 | 100% | 0.9375 |
6F3U_PLP_A_901 | 98% | 11% | 0.062 | 0.987 | 2.78 | 1.44 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
1JF9_PLP_A_500 | 100% | 12% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 0.9375 |