NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 3VYD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3VYD_NAG_A_401 | 34% | 22% | 0.221 | 0.906 | 0.6 | 2.61 | - | 5 | 0 | 0 | 100% | 0.9333 |
3VYD_NAG_B_401 | 12% | 4% | 0.28 | 0.811 | 0.75 | 4.73 | - | 5 | 0 | 0 | 100% | 0.9333 |
7XGK_NAG_A_401 | 73% | 15% | 0.09 | 0.915 | 1.09 | 2.68 | 1 | 7 | 0 | 0 | 100% | 0.9333 |
7XGO_NAG_A_401 | 69% | 17% | 0.094 | 0.906 | 0.98 | 2.59 | - | 8 | 0 | 0 | 100% | 0.9333 |
4Q1N_NAG_A_402 | 65% | 70% | 0.114 | 0.914 | 0.34 | 0.82 | - | - | 0 | 0 | 100% | 0.9333 |
4GJ6_NAG_A_1000 | 64% | 76% | 0.136 | 0.935 | 0.36 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
4GJA_NAG_A_1000 | 61% | 63% | 0.128 | 0.915 | 0.33 | 1.08 | - | 2 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |