Ligand validation:3PDU

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3PDU_NAP_H_301	93%	24%	0.047	0.979	1.55	1.59	4	12	0	100%	1
3PDU_NAP_F_301	92%	26%	0.05	0.978	1.52	1.51	3	11	0	100%	1
3PDU_NAP_A_301	91%	23%	0.05	0.977	1.57	1.6	6	11	3	100%	1
3PDU_NAP_E_301	88%	25%	0.055	0.973	1.55	1.54	4	10	0	100%	1
3PDU_NAP_D_301	87%	23%	0.057	0.972	1.61	1.56	4	12	2	100%	1
3PDU_NAP_B_301	87%	23%	0.057	0.969	1.59	1.57	4	11	0	100%	1
3PDU_NAP_C_301	85%	23%	0.059	0.966	1.58	1.59	5	13	0	100%	1
3PDU_NAP_G_301	69%	23%	0.082	0.936	1.62	1.57	5	12	0	100%	1
8G50_NAP_A_202	100%	33%	0.013	0.998	1.42	1.24	5	8	2	100%	1
6IJX_NAP_A_401	100%	57%	0.014	0.998	0.54	0.92	1	3	4	100%	1
2DBQ_NAP_A_401	100%	21%	0.017	0.998	1.43	1.86	9	22	0	100%	1
3M4H_NAP_A_500	100%	45%	0.017	0.998	1.13	0.92	5	2	1	100%	1
3LZ3_NAP_A_500	100%	46%	0.017	0.997	1.07	0.93	3	2	1	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3PDU | pdb_00003pdu