Ligand validation:3PDB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3PDB_PMP_D_432	88%	46%	0.082	0.962	0.97	1.02	1	2	4	100%	1
3PDB_PMP_B_432	81%	46%	0.092	0.95	0.96	1.03	1	2	2	100%	1
3PD6_PMP_A_1	94%	19%	0.066	0.974	1.15	2.13	2	9	8	100%	1
8PNX_PMP_A_301	100%	52%	0.014	0.998	0.57	1.15	-	2	0	100%	1
6YMD_PMP_B_502	100%	35%	0.017	0.998	1.11	1.34	-	3	0	100%	1
5DDU_PMP_C_601	100%	37%	0.019	0.998	1.11	1.26	2	3	2	100%	1
5VWQ_PMP_J_401	100%	33%	0.023	0.997	0.98	1.57	2	6	2	100%	1
8ONM_PMP_A_304	100%	63%	0.022	0.995	0.56	0.69	-	-	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3PDB | pdb_00003pdb