Ligand validation:3PD9

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3PD9_GOL_B_262	42%	68%	0.121	0.87	0.63	0.44	-	-	1	0	100%	1
3PD9_GOL_B_263	36%	58%	0.128	0.851	0.59	0.82	-	-	1	0	100%	1
3PD9_GOL_A_265	35%	60%	0.142	0.87	0.7	0.66	-	-	0	0	100%	1
3PD9_GOL_A_264	21%	73%	0.135	0.78	0.68	0.26	-	-	0	0	100%	1
3PD9_GOL_B_264	6%	64%	0.235	0.794	0.74	0.48	-	-	4	0	100%	1
5O9A_GOL_C_310	95%	86%	0.044	0.988	0.39	0.29	-	-	0	0	100%	1
5ZG1_GOL_B_907	95%	83%	0.045	0.987	0.3	0.43	-	-	0	0	100%	1
5YBG_GOL_E_905	89%	86%	0.059	0.983	0.16	0.5	-	-	2	0	100%	1
6YK4_GOL_A_305	85%	65%	0.063	0.971	0.74	0.44	-	-	0	0	100%	0.7
7F3O_GOL_C_805	84%	95%	0.064	0.971	0.12	0.28	-	-	0	0	100%	1
2YGX_GOL_A_1398	100%	61%	0.006	1	0.38	0.93	-	-	2	0	100%	1
5MR6_GOL_B_602	100%	60%	0.012	0.999	0.4	0.92	-	-	0	0	100%	1
5WM2_GOL_A_603	100%	86%	0.011	0.999	0.53	0.16	-	-	0	0	100%	1
5W5T_GOL_D_506	100%	87%	0.014	0.998	0.38	0.26	-	-	0	0	100%	1
3MG3_GOL_A_324	100%	77%	0.015	0.997	0.24	0.58	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.