Ligand validation:3NB8

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3NB8_EDO_A_402	54%	66%	0.102	0.898	0.43	0.7	-	-	0	0	100%	1
3NB8_EDO_A_410	49%	81%	0.111	0.887	0.29	0.47	-	-	5	0	100%	1
3NB8_EDO_A_404	48%	65%	0.114	0.89	0.38	0.75	-	-	0	0	100%	1
3NB8_EDO_A_401	36%	69%	0.124	0.844	0.35	0.68	-	-	0	0	100%	1
3NB8_EDO_A_411	33%	89%	0.126	0.834	0.53	0.08	-	-	0	0	100%	1
3NB8_EDO_A_407	28%	67%	0.148	0.845	0.34	0.75	-	-	3	0	100%	1
3NB8_EDO_A_405	25%	86%	0.142	0.818	0.59	0.1	-	-	1	0	100%	1
3NB8_EDO_A_406	23%	72%	0.171	0.856	0.5	0.45	-	-	2	0	100%	1
3NB8_EDO_A_412	15%	65%	0.156	0.772	0.38	0.77	-	-	0	0	100%	1
3NB8_EDO_A_414	6%	72%	0.174	0.695	0.55	0.41	-	-	6	0	100%	1
3NB8_EDO_A_408	5%	71%	0.215	0.75	0.34	0.63	-	-	0	0	100%	1
3NB8_EDO_A_403	4%	66%	0.174	0.64	0.53	0.58	-	-	0	0	100%	1
3NB8_EDO_A_415	2%	88%	0.237	0.681	0.45	0.17	-	-	1	0	100%	1
3NB8_EDO_A_409	1%	78%	0.298	0.652	0.43	0.39	-	-	0	0	100%	1
3F0L_EDO_A_406	65%	69%	0.095	0.938	0.47	0.54	-	-	0	0	100%	1
3F0M_EDO_A_405	48%	74%	0.126	0.909	0.43	0.47	-	-	0	0	100%	1
3NB9_EDO_A_402	47%	74%	0.133	0.916	0.29	0.59	-	-	4	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.