Ligand validation:3GY5

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3GY5_EDO_A_3	86%	81%	0.058	0.966	0.46	0.31	-	-	0	0	100%	1
3GY5_EDO_A_247	85%	80%	0.056	0.961	0.44	0.35	-	-	0	0	100%	1
3GY5_EDO_A_5	56%	79%	0.101	0.903	0.43	0.37	-	-	0	0	100%	1
3GY5_EDO_A_6	37%	75%	0.135	0.868	0.43	0.44	-	-	3	0	100%	1
3GY5_EDO_A_2	23%	67%	0.152	0.823	0.32	0.76	-	-	3	0	100%	1
3GY5_EDO_A_4	12%	80%	0.173	0.769	0.33	0.45	-	-	1	0	100%	1
3GY5_EDO_A_7	10%	88%	0.186	0.776	0.44	0.2	-	-	0	0	100%	0.75
4U2W_EDO_A_303	98%	78%	0.033	0.993	0.31	0.5	-	-	0	0	100%	0.94
3GY2_EDO_A_246	94%	88%	0.042	0.978	0.43	0.19	-	-	0	0	100%	1
4XOJ_EDO_A_304	92%	52%	0.051	0.981	0.5	1.18	-	-	0	0	100%	0.5
4AB8_EDO_A_1248	88%	64%	0.053	0.968	0.58	0.61	-	-	0	0	100%	1
3GY6_EDO_A_4	87%	76%	0.057	0.969	0.43	0.43	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.