Ligand validation:3GDN

HBX: benzaldehyde

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3GDN_HBX_A_530	85%	35%	0.058	0.965	1.89	0.71	4	-	0	0	100%	1
3GDN_HBX_B_533	80%	35%	0.063	0.951	1.87	0.7	4	-	0	0	100%	1
7BR1_HBX_A_201	88%	92%	0.053	0.967	0.05	0.42	-	-	0	0	100%	1
7YCB_HBX_A_201	83%	87%	0.068	0.972	0.18	0.46	-	-	0	0	100%	1
4US8_HBX_A_922	80%	59%	0.066	0.955	0.49	0.89	-	-	0	0	100%	0.3
6COI_HBX_A_303	72%	49%	0.078	0.941	0.81	1.05	-	-	4	0	100%	1
4PLU_HBX_B_201	65%	14%	0.09	0.93	1.74	2.03	2	3	1	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.