XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 3FYU designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3FYU_XYP_M_1003 | 44% | 49% | 0.182 | 0.91 | 1.13 | 0.86 | - | - | 0 | 0 | 100% | 1 |
3FYU_XYP_E_1002 | 39% | 48% | 0.203 | 0.909 | 1.08 | 0.92 | - | - | 0 | 0 | 100% | 1 |
3FYU_XYP_C_1001 | 32% | 47% | 0.202 | 0.877 | 1.16 | 0.9 | - | - | 0 | 0 | 100% | 1 |
3FYU_XYP_A_1000 | 29% | 49% | 0.239 | 0.899 | 1.07 | 0.91 | - | - | 0 | 0 | 100% | 1 |
3FYU_XYP_N_1006 | 26% | 48% | 0.237 | 0.878 | 1.14 | 0.87 | - | - | 0 | 0 | 100% | 1 |
3FYU_XYP_L_1005 | 24% | 44% | 0.245 | 0.877 | 1.23 | 0.93 | 1 | - | 0 | 0 | 100% | 1 |
3FYU_XYP_I_1004 | 19% | 45% | 0.261 | 0.858 | 1.22 | 0.91 | 1 | - | 0 | 0 | 100% | 1 |
3FYT_XYP_C_1003 | 33% | 46% | 0.17 | 0.849 | 1.21 | 0.87 | 2 | - | 0 | 0 | 100% | 1 |
1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
8Y00_XYP_D_201 | 99% | 28% | 0.032 | 0.986 | 0.63 | 2.19 | - | 7 | 1 | 0 | 90% | 0.9 |
2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |