UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3DXH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3DXH_UDP_A_126 | 36% | 31% | 0.153 | 0.843 | 0.93 | 1.78 | - | 6 | 0 | 0 | 100% | 1 |
| 3DXH_UDP_B_125 | 25% | 39% | 0.171 | 0.806 | 0.91 | 1.45 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3DXH_UDP_B_126 | 22% | 37% | 0.22 | 0.834 | 0.93 | 1.51 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3DXH_UDP_A_125 | 11% | 42% | 0.204 | 0.722 | 0.9 | 1.33 | 1 | 5 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
