Ligand validation:3DTU

TRD: TRIDECANE

TRD is a Ligand Of Interest in 3DTU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3DTU_TRD_D_7	36%	77%	0.148	0.885	0.24	0.58	-	-	2	100%	1
3DTU_TRD_A_1506	27%	81%	0.177	0.887	0.24	0.52	-	-	3	100%	1
3DTU_TRD_C_577	14%	84%	0.18	0.805	0.29	0.42	-	-	1	100%	1
3DTU_TRD_D_288	14%	85%	0.19	0.89	0.24	0.44	-	-	0	69%	1
3DTU_TRD_B_1023	12%	84%	0.181	0.855	0.25	0.45	-	-	1	69%	1
3DTU_TRD_A_1504	11%	83%	0.235	0.861	0.28	0.45	-	-	4	100%	1
3DTU_TRD_C_578	6%	85%	0.219	0.802	0.3	0.39	-	-	0	85%	1
3DTU_TRD_C_584	6%	85%	0.208	0.855	0.1	0.58	-	-	12	54%	1
3DTU_TRD_B_1031	5%	87%	0.231	0.827	0.28	0.37	-	-	0	69%	1
3DTU_TRD_B_1012	4%	85%	0.255	0.842	0.26	0.43	-	-	0	69%	1
3DTU_TRD_D_12	3%	85%	0.289	0.857	0.27	0.41	-	-	0	85%	0.75
3DTU_TRD_A_1009	3%	87%	0.235	0.827	0.23	0.41	-	-	0	54%	1
3DTU_TRD_A_1010	3%	81%	0.308	0.857	0.25	0.51	-	-	0	85%	0.75
3DTU_TRD_C_583	2%	86%	0.26	0.842	0.22	0.45	-	-	0	54%	1
3DTU_TRD_D_23	1%	86%	0.294	0.816	0.22	0.44	-	-	0	54%	0.75
3DTU_TRD_C_579	1%	90%	0.307	0.781	0.26	0.31	-	-	0	54%	1
3DTU_TRD_A_1014	1%	87%	0.391	0.894	0.22	0.43	-	-	0	54%	0.75
3DTU_TRD_C_580	1%	84%	0.36	0.802	0.25	0.45	-	-	0	69%	0.75
3DTU_TRD_A_1013	0%	89%	0.3	0.712	0.28	0.31	-	-	0	54%	1
3DTU_TRD_C_582	0%	87%	0.346	0.738	0.25	0.39	-	-	0	54%	0.75
3DTU_TRD_A_1505	0%	83%	0.392	0.726	0.26	0.47	-	-	0	85%	0.75
3DTU_TRD_A_1015	0%	80%	0.394	0.702	0.27	0.5	-	-	0	85%	0.75
3DTU_TRD_C_581	0%	80%	0.423	0.73	0.27	0.5	-	-	0	85%	0.75
2GSM_TRD_A_5006	32%	77%	0.137	0.847	0.28	0.54	-	-	2	100%	1
6PW0_TRD_D_303	30%	70%	0.148	0.927	0.12	0.85	-	-	0	69%	1
6PW1_TRD_D_301	29%	72%	0.141	0.913	0.12	0.81	-	-	0	69%	1
3OMI_TRD_A_610	19%	80%	0.167	0.823	0.36	0.43	-	-	1	100%	1
3OMA_TRD_D_3	18%	79%	0.206	0.882	0.2	0.59	-	-	1	100%	1
6GA3_TRD_A_303	96%	71%	0.035	0.978	0.11	0.84	-	-	0	100%	1
6GA5_TRD_A_303	92%	73%	0.042	0.966	0.1	0.79	-	-	3	100%	1
6GAG_TRD_A_303	90%	73%	0.048	0.966	0.1	0.79	-	-	0	100%	1
6GA7_TRD_A_303	89%	73%	0.05	0.967	0.1	0.79	-	-	0	100%	1
6GAH_TRD_A_303	89%	73%	0.048	0.963	0.1	0.79	-	-	1	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3DTU | pdb_00003dtu

TRD: TRIDECANE

TRD is a Ligand Of Interest in 3DTU designated by the RCSB