GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3BBF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3BBF_GDP_C_160 | 93% | 41% | 0.075 | 0.97 | 0.97 | 1.33 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3BBF_GDP_A_160 | 88% | 51% | 0.085 | 0.962 | 0.96 | 0.93 | 1 | 1 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_D_160 | 86% | 48% | 0.08 | 0.947 | 0.92 | 1.09 | - | 2 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_B_160 | 82% | 41% | 0.095 | 0.949 | 0.89 | 1.41 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_F_160 | 79% | 47% | 0.097 | 0.941 | 0.86 | 1.19 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_E_160 | 44% | 45% | 0.129 | 0.853 | 0.99 | 1.12 | 1 | 2 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8V3A_GDP_B_201 | 100% | 42% | 0.036 | 0.991 | 1.1 | 1.14 | 1 | 2 | 0 | 0 | 100% | 1 |
