2ZY3 | pdb_00002zy3


PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 2ZY3 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZY3_PLP_D_900Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZY3_PLP_D_900Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZY3_PLP_D_900Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2ZY3_PLP_D_900 76% 13% 0.148 0.9842.31 1.64 7 200100%1
2ZY3_PLP_A_900 75% 12% 0.149 0.9822.35 1.7 5 300100%1
2ZY3_PLP_B_900 72% 20% 0.153 0.9781.73 1.62 4 210100%1
2ZY3_PLP_F_900 71% 32% 0.152 0.9751.49 1.2 3 200100%1
2ZY3_PLP_C_900 69% 13% 0.164 0.982.13 1.79 5 400100%1
2ZY3_PLP_E_900 62% 18% 0.179 0.9712.14 1.39 6 200100%1
2ZY4_PLP_F_900 97% 8% 0.077 0.9922.71 2.02 6 400100%1
2ZY5_PLP_C_900 88% 13% 0.115 0.9922.12 1.8 3 410100%1
2BIE_PLP_A_1361 100% 38% 0.024 0.9961.23 1.19 1 310100%1
2X3L_PLP_A_1211 100% 19% 0.024 0.9951.74 1.73 2 210100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1