Ligand validation:2YP6

MLI: MALONATE ION

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2YP6_MLI_D_1188	83%	37%	0.059	0.958	1.24	1.19	-	-	0	0	100%	1
2YP6_MLI_C_1187	83%	33%	0.061	0.958	1.27	1.35	-	-	1	0	100%	1
2YP6_MLI_B_1188	80%	32%	0.062	0.947	1.14	1.52	-	1	0	0	100%	1
2YP6_MLI_A_1188	79%	36%	0.066	0.951	1.3	1.17	-	-	0	0	100%	1
2YP6_MLI_C_1188	24%	35%	0.135	0.801	1.14	1.39	-	-	0	0	100%	1
2YP6_MLI_B_1187	14%	37%	0.166	0.781	1.26	1.18	-	-	0	0	100%	1
2YP6_MLI_A_1187	13%	38%	0.146	0.737	1.16	1.19	-	-	0	0	100%	1
2YP6_MLI_D_1187	7%	38%	0.185	0.731	1.2	1.19	-	-	0	0	100%	1
9M9J_MLI_A_403	100%	38%	0.015	0.999	1.33	1.04	-	-	0	0	100%	1
5VIT_MLI_P_601	100%	34%	0.018	0.997	1.24	1.35	-	1	0	0	100%	1
4X1D_MLI_B_702	100%	9%	0.02	0.999	1.11	3.2	-	5	1	0	100%	1
5INB_MLI_A_401	100%	40%	0.02	0.996	1	1.26	-	1	0	0	100%	1
5J28_MLI_B_401	100%	32%	0.02	0.996	1.29	1.41	-	1	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.