Ligand validation:2YKY

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2YKY_EDO_B_1450	61%	72%	0.104	0.936	0.3	0.62	-	-	0	0	100%	1
2YKY_EDO_C_1445	53%	84%	0.126	0.934	0.45	0.27	-	-	0	0	100%	1
2YKY_EDO_A_1445	53%	83%	0.132	0.943	0.44	0.29	-	-	0	0	100%	1
2YKY_EDO_C_1451	51%	80%	0.126	0.922	0.4	0.38	-	-	0	0	100%	1
2YKY_EDO_B_1454	44%	76%	0.146	0.925	0.44	0.42	-	-	1	0	100%	1
2YKY_EDO_B_1452	42%	79%	0.148	0.917	0.31	0.48	-	-	1	0	100%	1
2YKY_EDO_B_1447	42%	72%	0.147	0.915	0.34	0.6	-	-	2	0	100%	1
2YKY_EDO_C_1446	40%	80%	0.148	0.909	0.45	0.34	-	-	0	0	100%	1
2YKY_EDO_C_1449	33%	87%	0.161	0.895	0.45	0.2	-	-	1	0	100%	1
2YKY_EDO_C_1454	30%	77%	0.171	0.895	0.34	0.49	-	-	0	0	100%	1
2YKY_EDO_B_1449	22%	88%	0.177	0.86	0.45	0.17	-	-	2	0	100%	1
2YKY_EDO_B_1446	10%	86%	0.261	0.902	0.32	0.34	-	-	7	0	100%	1
2YKY_EDO_C_1448	7%	76%	0.23	0.81	0.45	0.41	-	-	0	0	100%	1
2YKY_EDO_B_1453	7%	71%	0.265	0.856	0.24	0.72	-	-	5	0	100%	1
2YKY_EDO_B_1445	4%	74%	0.302	0.846	0.36	0.53	-	-	3	0	100%	1
2YKV_EDO_B_1446	89%	76%	0.057	0.977	0.58	0.28	-	-	1	0	100%	1
4AO4_EDO_B_1448	84%	73%	0.06	0.963	0.57	0.35	-	-	1	0	100%	1
2YKX_EDO_C_1445	69%	76%	0.095	0.956	0.41	0.44	-	-	0	0	100%	1
2YKU_EDO_C_1449	59%	77%	0.117	0.945	0.44	0.39	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.