Ligand validation:2YDP

EDG: 1,4-DIDEOXY-1,4-IMINO-L-ARABINITOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2YDP_EDG_A_500	92%	54%	0.047	0.975	0.56	1.02	-	1	0	0	100%	1
2YDP_EDG_C_500	89%	46%	0.051	0.968	0.8	1.18	-	-	0	0	100%	1
2YDP_EDG_B_500	85%	29%	0.056	0.958	0.94	1.87	1	2	0	0	100%	1
2YDT_EDG_A_500	97%	39%	0.035	0.982	0.74	1.53	-	1	0	0	100%	1
6F1J_EDG_A_401	96%	54%	0.039	0.98	0.3	1.27	-	-	0	0	100%	1
6ZQ1_EDG_AAA_701	89%	50%	0.05	0.967	0.47	1.3	-	1	0	0	100%	1
5JOX_EDG_B_601	80%	57%	0.065	0.953	0.39	1.05	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.