ADP: ADENOSINE-5'-DIPHOSPHATE
ADP is a Ligand Of Interest in 2Y8Q designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2Y8Q_ADP_E_1327 | 91% | 38% | 0.091 | 0.979 | 1.08 | 1.36 | 3 | 4 | 0 | 0 | 100% | 1 |
2Y8L_ADP_E_1327 | 87% | 36% | 0.107 | 0.981 | 0.96 | 1.55 | 1 | 5 | 0 | 0 | 100% | 1 |
4QFR_ADP_C_403 | 48% | 57% | 0.138 | 0.88 | 0.78 | 0.88 | - | 1 | 1 | 0 | 100% | 1 |
5UFU_ADP_C_403 | 25% | 58% | 0.247 | 0.885 | 0.66 | 0.96 | - | 1 | 0 | 0 | 100% | 1 |
6E4W_ADP_C_403 | 18% | 58% | 0.285 | 0.87 | 0.68 | 0.93 | - | 2 | 1 | 0 | 100% | 1 |
5KQ5_ADP_C_403 | 17% | 58% | 0.284 | 0.864 | 0.71 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
3KB1_ADP_A_301 | 100% | 22% | 0.021 | 0.996 | 2.06 | 1.21 | 6 | 4 | 1 | 0 | 100% | 1 |
5GZA_ADP_A_401 | 100% | 2% | 0.019 | 0.997 | 3.36 | 3.39 | 13 | 11 | 1 | 0 | 100% | 1 |
5KHW_ADP_A_1201 | 100% | 41% | 0.023 | 0.995 | 1.1 | 1.2 | 1 | 2 | 0 | 0 | 100% | 1 |
8VZA_ADP_A_603 | 100% | 37% | 0.024 | 0.995 | 0.96 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
1PHP_ADP_A_396 | 100% | 24% | 0.026 | 0.995 | 1.29 | 1.8 | 3 | 11 | 1 | 0 | 100% | 1 |