CVM: CYMAL-4

CVM is a Ligand Of Interest in 2XQS designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2XQS_CVM_E_106 15% 92% 0.265 0.9720.39 0.16 - -1018%18.18
2XQS_CVM_E_103 14% 87% 0.26 0.9630.33 0.37 - -1018%18.18
2XQS_CVM_B_103 14% 88% 0.254 0.9560.32 0.35 - -1018%18.18
2XQS_CVM_C_103 14% 84% 0.275 0.9730.35 0.42 - -0018%18.18
2XQS_CVM_B_106 12% 92% 0.297 0.9730.36 0.18 - -0018%18.18
2XQS_CVM_A_106 9% 92% 0.326 0.9650.34 0.2 - -0018%18.18
2XQS_CVM_D_106 8% 88% 0.328 0.9510.31 0.35 - -0018%18.18
2XQS_CVM_A_103 6% 88% 0.387 0.9630.32 0.34 - -0018%18.18
2XQS_CVM_A_110 5% 85% 0.37 0.9380.34 0.39 - -0018%18.18
2XQS_CVM_D_107 5% 89% 0.403 0.9650.39 0.26 - -0018%18.18
2XQS_CVM_D_103 5% 82% 0.396 0.9470.35 0.44 - -0018%18.18
2XQS_CVM_E_104 4% 90% 0.407 0.9520.36 0.26 - -1018%18.18
2XQS_CVM_A_107 4% 88% 0.437 0.9640.4 0.27 - -0018%18.18
2XQS_CVM_A_109 3% 89% 0.428 0.9330.38 0.27 - -0018%18.18
2XQS_CVM_B_104 3% 85% 0.457 0.9480.34 0.4 - -0018%18.18
2XQS_CVM_E_109 3% 86% 0.426 0.8960.4 0.33 - -0018%18.18
2XQS_CVM_B_109 2% 86% 0.509 0.9550.33 0.38 - -0018%18.18
2XQS_CVM_C_107 2% 89% 0.49 0.9140.42 0.24 - -0018%18.18
2XQS_CVM_C_106 2% 92% 0.559 0.980.37 0.18 - -0018%18.18
2XQS_CVM_D_110 2% 88% 0.529 0.9410.39 0.27 - -0018%18.18
2XQS_CVM_A_104 2% 90% 0.56 0.950.38 0.22 - -0018%18.18
2XQS_CVM_B_110 1% 91% 0.563 0.9490.34 0.25 - -2018%18.18
2XQS_CVM_C_110 1% 90% 0.613 0.9630.36 0.24 - -0018%18.18
2XQS_CVM_D_104 1% 90% 0.622 0.9580.35 0.25 - -0018%18.18
2XQS_CVM_E_102 1% 61% 0.545 0.7260.57 0.9 1 200100%0.6364
2XQS_CVM_B_102 1% 60% 0.497 0.6740.56 0.98 1 300100%0.6364
2XQS_CVM_D_109 1% 83% 0.537 0.850.38 0.4 - -1018%18.18
2XQS_CVM_C_102 1% 64% 0.452 0.6150.58 0.8 1 200100%0.6364
2XQS_CVM_B_107 1% 92% 0.635 0.9410.36 0.17 - -1018%18.18
2XQS_CVM_E_107 1% 89% 0.669 0.9670.35 0.28 - -1018%18.18
2XQS_CVM_C_104 1% 91% 0.678 0.9670.32 0.24 - -3018%18.18
2XQS_CVM_C_109 1% 86% 0.673 0.9190.36 0.35 - -1018%18.18
2XQS_CVM_D_102 1% 52% 0.611 0.7030.6 1.24 1 400100%0.6364
2XQS_CVM_A_108 1% 88% 0.714 0.9540.33 0.35 - -0018%18.18
2XQS_CVM_C_108 0% 92% 0.763 0.9040.36 0.19 - -0018%18.18
2XQS_CVM_A_102 0% 48% 0.613 0.5980.64 1.34 1 600100%0.6364
2XQS_CVM_B_108 0% 88% 0.763 0.8790.33 0.33 - -0018%18.18
2XQS_CVM_D_108 0% 93% 0.826 0.8990.34 0.17 - -0018%18.18
2XQS_CVM_E_108 0% 92% 0.979 0.920.39 0.15 - -0018%18.18
2XQS_CVM_E_110 0% 90% 0.987 0.9050.36 0.26 - -0018%18.18
2XQU_CVM_C_103 38% 88% 0.082 0.9310.37 0.29 - -0018%18.18
2WIE_CVM_B_108 27% 88% 0.129 0.9220.34 0.33 - -0018%18.18
2XQT_CVM_C_1086 12% 75% 0.26 0.9270.23 0.73 - -1021%0.2121
4IUU_CVM_B_302 17% 62% 0.238 0.8140.46 0.99 - 320100%1
4IUR_CVM_A_302 15% 52% 0.225 0.8480.46 1.37 - 70067%0.6667
4IUQ_CVM_B_302 15% 17% 0.274 0.8361.23 2.33 5 20 10100%1