UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE
UPG is a Ligand Of Interest in 2Q3E designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2Q3E_UPG_A_501 | 97% | 39% | 0.054 | 0.979 | 1.04 | 1.24 | 1 | 9 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_C_501 | 97% | 32% | 0.055 | 0.98 | 1.2 | 1.39 | 1 | 6 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_I_501 | 95% | 31% | 0.062 | 0.972 | 1.46 | 1.22 | 3 | 6 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_G_501 | 95% | 42% | 0.062 | 0.971 | 0.86 | 1.28 | - | 6 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_J_501 | 94% | 44% | 0.063 | 0.971 | 0.96 | 1.1 | 3 | 5 | 3 | 0 | 100% | 1 |
| 2Q3E_UPG_D_501 | 94% | 43% | 0.063 | 0.971 | 0.93 | 1.16 | 2 | 4 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_H_501 | 93% | 32% | 0.066 | 0.968 | 1.39 | 1.2 | 4 | 5 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_B_501 | 92% | 36% | 0.066 | 0.965 | 1.27 | 1.16 | 2 | 4 | 4 | 0 | 100% | 1 |
| 2Q3E_UPG_F_501 | 92% | 38% | 0.069 | 0.967 | 0.99 | 1.34 | 2 | 6 | 4 | 0 | 100% | 1 |
| 2Q3E_UPG_K_501 | 91% | 37% | 0.071 | 0.963 | 1.18 | 1.21 | 2 | 4 | 4 | 0 | 100% | 1 |
| 2Q3E_UPG_E_501 | 90% | 38% | 0.074 | 0.964 | 1.08 | 1.22 | 4 | 4 | 4 | 0 | 100% | 1 |
| 2Q3E_UPG_L_501 | 89% | 37% | 0.075 | 0.961 | 1.05 | 1.32 | 2 | 7 | 2 | 0 | 100% | 1 |
| 4EDF_UPG_B_501 | 100% | 33% | 0.023 | 0.995 | 1.16 | 1.4 | 4 | 6 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_C_501 | 98% | 21% | 0.045 | 0.982 | 1.28 | 1.88 | 3 | 12 | 0 | 0 | 100% | 1 |
| 6C4J_UPG_A_502 | 96% | 32% | 0.057 | 0.972 | 1.22 | 1.37 | 2 | 5 | 1 | 0 | 100% | 1 |
| 6C5Z_UPG_F_501 | 95% | 33% | 0.059 | 0.971 | 1.2 | 1.35 | 2 | 6 | 2 | 0 | 100% | 1 |
| 6C5A_UPG_F_502 | 93% | 32% | 0.067 | 0.967 | 1.19 | 1.4 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4Y6U_UPG_A_404 | 100% | 26% | 0.02 | 0.997 | 1.16 | 1.72 | 3 | 11 | 0 | 0 | 100% | 1 |
| 5HUV_UPG_B_501 | 100% | 6% | 0.022 | 0.997 | 2.91 | 1.99 | 11 | 11 | 2 | 0 | 100% | 1 |
| 4Y9X_UPG_A_404 | 100% | 36% | 0.024 | 0.997 | 0.98 | 1.42 | 2 | 6 | 1 | 0 | 100% | 1 |
| 6K8D_UPG_D_301 | 100% | 61% | 0.023 | 0.995 | 0.45 | 0.87 | - | 3 | 0 | 0 | 100% | 1 |
| 4HO8_UPG_C_300 | 100% | 33% | 0.026 | 0.993 | 0.93 | 1.59 | 1 | 9 | 4 | 0 | 100% | 1 |














