TYD: THYMIDINE-5'-DIPHOSPHATE

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TYD is a Ligand Of Interest in 2PA7 designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2PA7_TYD_B_140 53% 40% 0.088 0.8670.94 1.33 2 400100%1
2PA7_TYD_A_141 5% 32% 0.201 0.7141.27 1.43 1 600100%1
2PAE_TYD_A_140 72% 29% 0.083 0.9511.54 1.34 2 420100%1
2PAM_TYD_B_140 72% 33% 0.084 0.9511.5 1.17 1 510100%1
2PAK_TYD_B_140 67% 31% 0.082 0.9261.31 1.46 2 520100%1
3OTI_TYD_B_377 98% 26% 0.035 0.9891.33 1.66 4 700100%1
3EVO_TYD_A_160 98% 22% 0.036 0.991.41 1.81 4 700100%1
5WXK_TYD_A_401 97% 21% 0.037 0.9871.33 1.94 3 600100%1
1LVW_TYD_A_3002 96% 30% 0.041 0.9841.78 1.05 4 200100%1
3RYK_TYD_B_182 96% 11% 0.042 0.9852.35 1.83 4 800100%0.7