N5P: 1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO -1H-INDOLE
N5P is a Ligand Of Interest in 2OYQ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2OYQ_N5P_A_905 | 57% | 46% | 0.129 | 0.906 | 1 | 1 | 3 | 2 | 1 | 0 | 100% | 0.7 |
| 2OYQ_N5P_A_904 | 51% | 48% | 0.129 | 0.884 | 0.97 | 0.95 | 2 | 2 | 0 | 0 | 100% | 0.7 |
| 2OYQ_N5P_I_704 | 31% | 47% | 0.184 | 0.858 | 1.03 | 0.93 | 3 | 2 | 0 | 0 | 100% | 0.7 |
| 2OYQ_N5P_C_904 | 23% | 47% | 0.158 | 0.783 | 1.01 | 0.94 | 3 | 1 | 0 | 0 | 100% | 0.7 |
| 2OZM_N5P_A_905 | 95% | 42% | 0.061 | 0.974 | 0.91 | 1.23 | 1 | 7 | 1 | 0 | 100% | 1 |
| 3RSR_N5P_A_841 | 55% | 8% | 0.106 | 0.873 | 2.5 | 2 | 8 | 15 | 2 | 0 | 100% | 1 |
| 3T3F_N5P_A_836 | 42% | 38% | 0.133 | 0.852 | 1.35 | 0.97 | 5 | 1 | 27 | 0 | 100% | 0.77 |














